Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq8600 93.3 4e-14 >seq8600 Length=62120 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/215 (71%), Gaps = 7/215 (3%) Strand=Plus/Plus Query 94198 CACGGTCAGCGTCGTGTTCAGCAGCAGCACCCCGCGGCGC-GCCCAGGCCTCCAGGCAGC 94256 ||||||||| | | ||||||||||||||| || | |||| ||||||||| | || | Sbjct 50756 CACGGTCAGGCTGGAGTTCAGCAGCAGCACGCC-CTGCGCCGCCCAGGCCGCAAGATGCC 50814 Query 94257 CGTGGGCGGGCGCGGGCAGCGTCGGGTACGTCGCCCGGACCGCCGCGAAGATGTTGGCCA 94316 ||||||| ||| ||||| | | | |||| | || |||||||||| || Sbjct 50815 CGTGGGCAGGCAGCGGCAGGCCCAGATCTCGCGCCTGTTCCTT---GAAGATGTTGCGCA 50871 Query 94317 GGCTCGGGGGGATCG-GCACCCCGCGCCGGACGCTGAAGGCCAGCCCGTGGGCCTGGCCC 94375 |||| || || | | || ||| | | | ||| ||||||||||| | |||||||| Sbjct 50872 GGCTGGGTGGCACCTTGCGGCCCAC-CGGCACGGAAAAGGCCAGCCCTTCAGCCTGGCCA 50930 Query 94376 GGCCCGTGGTACGGGTCCTGGCCGATGATGACCAC 94410 || |||||||| ||||| ||||| | ||||| ||| Sbjct 50931 GGGCCGTGGTAGGGGTCTTGGCCCAGGATGAGCAC 50965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458895361913760