Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq6668 210 3e-50 >seq6668 Length=1290103 Score = 210 bits (232), Expect = 3e-50 Identities = 209/271 (77%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||||||||||| |||||| ||||||||||| || ||||||||||| || || Sbjct 1113617 CGCCAAGCGTCATCGCAAGGTTCTTCGCGATAACATCCAGGGTATCACCAAGCCCGCCAT 1113558 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| ||||||||||| |||||| ||||||| | |||| || |||| Sbjct 1113557 CCGCCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATCTCTGGCCTCATCTACGAGGAGAC 1113498 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| | |||||| ||| ||| |||| || || || ||||||||| Sbjct 1113497 CCGCGGTGTCCTCAAGGTGTTCCTCGAGAACGTGATCCGCGACGCCGTCACCTATACCGA 1113438 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| |||||| ||||||| ||||||| || |||| || || || Sbjct 1113437 GCACGCCAAGCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCTCTGAAGCGCCAGGG 1113378 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 || | | || ||||| ||| ||||| || Sbjct 1113377 TCGCACCCTCTACGGTTTCGGAGGTTAAACT 1113347 Score = 208 bits (230), Expect = 1e-49 Identities = 207/268 (77%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||||||||||| |||||| ||||||||||| || ||||||||||| || || Sbjct 1110340 CGCCAAGCGTCATCGCAAGGTTCTTCGCGATAACATCCAGGGTATCACCAAGCCCGCCAT 1110281 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| ||||||||||| |||||| ||||||| | |||| || |||| Sbjct 1110280 CCGCCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATCTCTGGCCTCATCTACGAGGAGAC 1110221 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| | |||||| ||| ||| |||| || || || ||||||||| Sbjct 1110220 CCGCGGTGTCCTCAAGGTGTTCCTCGAGAACGTGATCCGCGACGCCGTCACCTATACCGA 1110161 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| |||||| ||||||| | ||||| || |||| || || || Sbjct 1110160 GCACGCCAAGCGCAAGACCGTCACCGCCATGGACGTTGTCTACGCTCTGAAGCGCCAGGG 1110101 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | |||| ||||| ||| ||||| Sbjct 1110100 TCGCACCCTTTACGGTTTCGGAGGTTAA 1110073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79066938321948