Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq4890 80.6 5e-11 >seq4890 Length=1065744 Score = 80.6 bits (88), Expect = 5e-11 Identities = 183/273 (67%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 4429 CCACCTGGTAGCAAGCAACAAAAACTCACGACAACTCTGTACGATAAAAATAATTATGTT 4488 ||||||||| | ||||| | ||||| |||||| | ||||| || | || || ||| Sbjct 86498 CCACCTGGTGGTAAGCATCGCAAACTGTTGACAACATTCTACGACAAGAGGAACTACGTT 86439 Query 4489 ATTCACTATAAAAATTTGAAACAATGTTTAGATTTAGGTTTAGTTCTTAAGAAAATACAC 4548 |||||| | || ||| || || | | || |||||||| | | || |||||| Sbjct 86438 GTTCACTTCAGAACTTTAAAGCATGCTGTTCATCATGGTTTAGTAGTAACCAAGATACAC 86379 Query 4549 CTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATATCGATAAAAATACCGC- 4607 ||| ||||| || || |||| || ||||| | |||| ||| || ||||| Sbjct 86378 AAAGTTTTGAAGTTCGACCAATGAGCGTGGCTAGCACCATACATCAATCTTAATACATTG 86319 Query 4608 ATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGC 4667 |||| || | || ||| || || ||||| | || | ||||||||||| || || Sbjct 86318 ATGCGTGCAAAT-GCGTGGAACGACTTTAAAAAAGATTTCTTCAAATTAATGAACAACGC 86260 Query 4668 GGTTTTTGGAAAGACGATGGAGAATGTACGAAA 4700 || | || || ||||||||||| || |||| Sbjct 86259 CGTCTACGGCAAAACGATGGAGAACGTGAGAAA 86227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97963887101944