Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq6036 677 0.0 >seq6036 Length=8020 Score = 677 bits (750), Expect = 0.0 Identities = 728/963 (76%), Gaps = 0/963 (0%) Strand=Plus/Plus Query 135365 TGGGAACAGTTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTT 135424 ||||||| ||||| | ||| |||| || || || ||||| | || | ||||||||| Sbjct 33 TGGGAACGTTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTT 92 Query 135425 GGAACGCTGATGATTCCTACTCTTCTCGCAGCTGCTATCTGCTTTATTGTTGCTTTCATC 135484 || | ||| | ||||| | | |||| || || | || | || |||||| Sbjct 93 GGTTGTTTAATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCATTCATC 152 Query 135485 GCTGCACCTCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTAC 135544 || || ||||| || ||||| || || ||||| || || || || ||||| || | ||| Sbjct 153 GCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTATTATAC 212 Query 135545 GGAAATAACATCATCTCTGGTGCTGTTATCCCTTCTAGCAACGCCATCGGCCTTCACTTC 135604 || || ||||||||||||||||| ||||||||| | ||||| ||||| | |||||| Sbjct 213 GGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATGCACTTC 272 Query 135605 TATCCCATCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAA 135664 || || || |||||||| ||||| | ||||||||| |||| || ||||||||||| ||| Sbjct 273 TACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCTTACCAA 332 Query 135665 CTAGTGGTCTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACTC 135724 || | || | |||||| | | || || |||||||||||||| || |||||| | Sbjct 333 TTAATCGTTTGTCACTTCTTATTAGGAGTAGCATCTTACATGGGTCGTGAATGGGAATTA 392 Query 135725 TCTTACCGACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCT 135784 |||||||| | |||||||| |||||||| | || |||| ||| || || || || || Sbjct 393 TCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCAGTAGCAGCA 452 Query 135785 GCTACTGCTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCG 135844 ||| |||| || ||| | || ||||| |||| |||||||| ||| |||||||||||| Sbjct 453 GCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGATGGTATGCCT 512 Query 135845 CTTGGCATTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTC 135904 | || |||||||| ||||| |||| |||| | || ||||| || || ||||||||| | Sbjct 513 TTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCACAACATTTTA 572 Query 135905 ATGCATCCTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCT 135964 ||||| || ||||||||| || |||||||| || || ||||||||| | ||||| ||| Sbjct 573 ATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTATTCTCAGCT 632 Query 135965 ATGCATGGATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAG 136024 ||||| || || | || || ||| | | | ||||| || ||||| ||||| Sbjct 633 ATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGCGAATCAACT 692 Query 136025 AACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGT 136084 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||| Sbjct 693 AACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCACGGT 752 Query 136085 TACTTCGGTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTT 136144 |||||||||||| | ||||||||||| || || ||||||||||||||| | ||||||| Sbjct 753 TACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCTTTACACTTC 812 Query 136145 TTCCTTGCTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTATCTACGATG 136204 ||| | ||| ||||| ||| | ||||||||||| |||| |||| | ||| ||| Sbjct 813 TTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATTAGTACTATG 872 Query 136205 GCGTTCAACCTCAATGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAAGGTCGTGTA 136264 ||||||||| | || || |||||||||||||| || ||||| ||| ||||||||||| Sbjct 873 GCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTA 932 Query 136265 CTCAACACCTGGGCAGATGTGCTGAATCGTGCTGGTCTGGGTATGGAGGTGATGCACGAG 136324 ||||||| ||||| ||| | | || ||||||| | | |||||||| || |||||||| Sbjct 933 ATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTAATGCACGAA 992 Query 136325 CGT 136327 ||| Sbjct 993 CGT 995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627897071014400