Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq6036 558 1e-154 >seq6036 Length=8020 Score = 558 bits (618), Expect = 1e-154 Identities = 742/1024 (72%), Gaps = 6/1024 (1%) Strand=Plus/Plus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || |||| ||| | || ||||| || ||||| | || | ||||||||||| | Sbjct 42 TTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTTGGTTGTTTA 101 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||| | ||| ||| || | || ||| |||| | || |||| || |||||||| || Sbjct 102 ATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCATTCATCGCAGCTCCT 161 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || || ||||| ||||| || ||||||||||| | || || ||| | ||||| ||||| Sbjct 162 CCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTATTATACGGTAACAAC 221 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 || || ||||| ||||| | || || || || || || || ||||||| || || || Sbjct 222 ATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATGCACTTCTACCCAATT 281 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 |||||||| | | | |||||||||||||||||||| ||||| || ||| | | || Sbjct 282 TGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCTTACCAATTAATCGTT 341 Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649 | ||||||||| ||||||||||| | ||| ||| | | |||||| |||||||| | Sbjct 342 TGTCACTTCTTATTAGGAGTAGCATCTTACATGGGTCGTGAATGGGAATTATCTTACCGT 401 Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709 ||||| ||| | || ||||| |||||||| | | || ||| || |||||||| ||| Sbjct 402 TTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCAGTAGCAGCAGCTTCTGCA 461 Query 19710 GTGTTTCTCGTTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATC 19769 || || | || |||||| |||| ||||| || ||||||||||||| | ||||| Sbjct 462 GTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGATGGTATGCCTTTAGGTATT 521 Query 19770 TCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCG 19829 ||||||||||| ||||| ||||| ||||||||||| || ||||| || | ||||| || Sbjct 522 TCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCACAACATTTTAATGCACCCA 581 Query 19830 TTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGA 19889 ||||||||| ||||||||||| ||||| ||||| ||| | ||||| ||||||||||| Sbjct 582 TTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTATTCTCAGCTATGCACGGT 641 Query 19890 AGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGC 19949 || || ||||| || | || ||||||||||| | ||| ||||| || Sbjct 642 TCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGCGAATCAACTAACTACGGT 701 Query 19950 TATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGG 20009 || || ||||| ||||| ||||| || || || || || || || ||||| ||||| || Sbjct 702 TACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCACGGTTACTTCGGT 761 Query 20010 AGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCT 20069 | || || || ||||| ||||| ||||| || |||||| ||||||| ||||| | ||| Sbjct 762 CGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCTTTACACTTCTTCTTAGCT 821 Query 20070 ACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAAC 20129 | || || | || || ||| | || | ||||| || | |||||||| |||||| Sbjct 822 TTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATTAGTACTATGGCGTTCAAC 881 Query 20130 CTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGATGTCA-ACGGAAAGATAATCCCAAC 20188 | || ||||| ||||| ||||| ||||| || ||| ||| | || ||||| || Sbjct 882 TTAAACGGTTTCAACTTCAACCAATCAGTTGTAGAT-TCACAAGGTCGTGTAATCAACAC 940 Query 20189 ATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGC 20248 ||||||||| | | || | ||| | | || | ||||| |||||||| || || || Sbjct 941 TTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTAATGCACGAACGTAACGC 1000 Query 20249 TCATAACTTCCCACTTGATTTAGCTTCGGCTG-AGTCAACAAACA-TTGCACTAACAGCT 20306 || ||||||||| | ||||||||||| | || ||| | | || |||| |||||||| Sbjct 1001 GCACAACTTCCCATTAGATTTAGCTTCAGGTGAAGT--ATTACCAGTTGCTTTAACAGCT 1058 Query 20307 CCAG 20310 |||| Sbjct 1059 CCAG 1062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144426101055216