Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= NC_006884.2
Length=178249
Score E
Sequences producing significant alignments: (Bits) Value
seq6036 735 0.0
>seq6036
Length=8020
Score = 735 bits (814), Expect = 0.0
Identities = 795/1043 (76%), Gaps = 14/1043 (1%)
Strand=Plus/Plus
Query 170649 TTTCAGGATGGGACGAGTTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTG 170708
||||| |||||| || |||| ||| | || ||||| || || | ||| | |
Sbjct 25 TTTCATTATGGGAACGTTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCG 84
Query 170709 GTTGGTTTGGTGTCTTAATGATCCCATGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAG 170768
||||||||||| |||||| |||| | |||| || || |||||| ||| | |
Sbjct 85 GTTGGTTTGGTTGTTTAATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCG 144
Query 170769 CATTCATCGCTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTT 170828
|||||||||| ||||||||||| |||||||| || ||| | || ||||| || ||||| |
Sbjct 145 CATTCATCGCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCAT 204
Query 170829 TCTTATATGGTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGAT 170888
| ||||| ||||||||||||||||||||||| || | || ||| ||||| || ||
Sbjct 205 TATTATACGGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTA 264
Query 170889 TACACTTCTATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTC 170948
| |||||||| || || ||||||||||| | || || |||||||| |||||||| ||||
Sbjct 265 TGCACTTCTACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTC 324
Query 170949 CTTACCAGTTAGTTATTTTCCACTTCCTTATT-GGAATCTCTGCCTACATGGGTAGACAG 171007
||||||| ||| | ||| ||||| |||||| ||| | | | ||||||||| | |
Sbjct 325 CTTACCAATTAATCGTTTGTCACTT-CTTATTAGGAGTAGCATCTTACATGGGTCGTGAA 383
Query 171008 TGGGAACTATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCT 171067
|||||| |||| ||| | |||| ||| | |||||||| | ||||| | ||| || ||
Sbjct 384 TGGGAATTATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCA 443
Query 171068 GTATCTGCAGCATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGAT 171127
||| | ||||| | |||||||||| | || || ||| | ||||| |||||||||||||||
Sbjct 444 GTAGCAGCAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGAT 503
Query 171128 GGTATGCCACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACAC 171187
|||||||| ||||||| || ||||| |||||||||||||| || |||||||| || |||
Sbjct 504 GGTATGCCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCAC 563
Query 171188 AACATACTAATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTC 171247
||||| |||||||||| ||||| ||||| ||||| || ||| | || |||||| | |
Sbjct 564 AACATTTTAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTA 623
Query 171248 TTCAGTGCAATGCACGGTTCTCTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGAAC 171307
||| || ||||||||||| |||| || |||||| |||| | || |||||| |||
Sbjct 624 TTCTCAGCTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACT--GAAA 681
Query 171308 GAGAGTCAA--AACTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTG 171365
| || |||| |||||||| || || ||||| |||||||||||||| || ||||| ||||
Sbjct 682 GCGAATCAACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTG 741
Query 171366 CTGCTCATGGATACTTCGGTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTT 171425
| ||||| || ||||||||| | ||||||||||| || || ||||||||||||||||||
Sbjct 742 CAGCTCACGGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTG 801
Query 171426 CATTACACTTCTTCCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCTATGGGTA 171485
| |||||||||||| | ||| ||| || || | || | |||||||| |||||||||
Sbjct 802 CTTTACACTTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTA 861
Query 171486 TCTGTACAATGGCATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAA 171545
| |||| ||||| |||||| | ||||| ||||||||||||||||||||||||||| ||
Sbjct 862 TTAGTACTATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCAC 921
Query 171546 ACGGAAAGATTGT-ACCAACA--TGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGG 171602
| || ||| | ||||| |||| ||| | ||||| | || | | || ||||
Sbjct 922 AAGG---TCGTGTAATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGG 978
Query 171603 AAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCATCTGCTG-AGTCT 171661
|||| ||||| ||| | || || |||||||||||| |||| |||| || | || ||| |
Sbjct 979 AAGTAATGCACGAACGTAACGCGCACAACTTCCCATTAGATTTAGCTTCAGGTGAAGTAT 1038
Query 171662 ACAACAGTTGCATTAACTGCACC 171684
| ||||||| ||||| || ||
Sbjct 1039 -TACCAGTTGCTTTAACAGCTCC 1060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570204388139040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |