Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_006938.1 Length=63649 Score E Sequences producing significant alignments: (Bits) Value seq6557 147 9e-31 >seq6557 Length=877522 Score = 147 bits (162), Expect = 9e-31 Identities = 214/298 (72%), Gaps = 7/298 (2%) Strand=Plus/Plus Query 9030 CAGGCCGCCGCCACCATGCGGATGGGAGGTGGCATCGGCTACGACTTCTCCACCCTCCGT 9089 |||||||||| |||||||| || |||||| |||| ||||||||||| | | ||| Sbjct 124910 CAGGCCGCCGAAACCATGCGTCGCGGTGGTGGCGTCGGTTACGACTTCTCTTCGATTCGT 124969 Query 9090 CCCAACGGAGCCCTCATCAAGAAGCTCCAGTCGCGGTCCTCCGGGCCGCTCTCCTTCATG 9149 || | || |||| | ||||| |||||||| |||| || || | |||| |||| Sbjct 124970 CCGCAGGGCGCCCACGTCAAGGGTACGCAGTCGCGTGCCTCGGGCCCCGTATCCTACATG 125029 Query 9150 CAGATCTACGACTCCGT--GTGCAAGTGCGTCGCCAGCTCTGGCCACCGCCGTGGCGCGC 9207 | ||| ||| |||| |||| || ||| | | | ||| ||| |||||||||| Sbjct 125030 CGTGTCTTCGA--CCGTTCGTGCGAGACCGTGGAATCCGCCGGCGCCCGTCGTGGCGCGC 125087 Query 9208 AGATGGGCGTCCTCCGAGTGGACCACCCGGACATCGAGGAGTTCATTCGCGCCAAGCACA 9267 |||||||||| || || || || ||||||||||| | |||||| | ||||||| ||| Sbjct 125088 AGATGGGCGTGCTGCGCTGCGATCATCCGGACATCGAAGTGTTCATCCACGCCAAGGACA 125147 Query 9268 ACGAGGACAACCTCACCGGGTTCAACACCTCCATCGCCATCACCGACCGCTTCATGGA 9325 | ||| | |||| ||| ||||||| ||||||| | | ||||| ||||||||| Sbjct 125148 A--AGG-CGACCTGACCAACTTCAACATTTCCATCGGCGTGACCGATGCCTTCATGGA 125202 Score = 100 bits (110), Expect = 1e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 9435 GCCGAGCCCGGCACCCTGTTCATCGACCAGATCAACCGCATGAACAATCTCAAGTACTGC 9494 |||||||| |||| ||||||| |||||| || ||| ||||| ||||| || ||| Sbjct 125366 GCCGAGCCGGGCATCCTGTTCCTCGACCGCATGAACAAAGACAACAACCTCAATTATTGC 125425 Query 9495 GAGACCATCGCCGCCACCAATCCCTGCGGCGAGCAGCCCCTCCCACCGTACGGTGCCTGC 9554 || |||| |||||||| ||||||| |||||||||||| || || ||||| |||| Sbjct 125426 GAAGTGATCGAGGCCACCAACCCCTGCGCCGAGCAGCCCCTGCCCCCCTACGGCTGCTGC 125485 Query 9555 CTCTTGGGCTCCTTCAACCT 9574 |||||| || ||||||| Sbjct 125486 TGCTTGGGATCGATCAACCT 125505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203529583581560