Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_007056.1 Length=45286 Score E Sequences producing significant alignments: (Bits) Value seq1653 149 2e-31 >seq1653 Length=34387 Score = 149 bits (164), Expect = 2e-31 Identities = 347/516 (67%), Gaps = 7/516 (1%) Strand=Plus/Plus Query 28535 AGGATTACTTATTTTCCACTCTTTTGCAGTCATACCAAACAACGCGACATTTAATAAATC 28594 ||||||||| ||||| | ||| ||||| ||||||| | || | |||||||||||| Sbjct 277 AGGATTACTCTGCTTCCAGTTTTTAGCAGTTGTACCAAAAATTGCAATATTTAATAAATC 336 Query 28595 GGCTTCTGTAGCATATGTATAACCGAT-TTGTTGTTTTGTTAACTTTGAATTAATTA-AA 28652 ||||| ||||| | ||||| | || | ||| | | ||| | ||| || | Sbjct 337 CGCTTCATCTGCATAAAT-TAACCATTCTTTATCTTTCGACACATTTAATTTAGGTATGA 395 Query 28653 TT--TTCTTTTATAGCATCAGTGAGAATAGTATAATTAGATTTACTTATAAAACGTTTAA 28710 || ||||| |||| ||| || ||||| || ||| |||| || || | ||| | Sbjct 396 TTGAATCTTTAATAGAATCTGTATGAATACGGTAGTTAATTTTAGAAATGAACCTTTTTA 455 Query 28711 CATCCCAATTTATACGTTCAGGGTCATTTTCTTGTTCTTTTAATCTTTGGTAATCTTGAA 28770 |||||||| || | || | | | | ||||| || ||||| ||||| | |||| || Sbjct 456 AATCCCAATCTAAATTTTGACGACCTTGTTCTTCTTGTTTTAGCCTTTGAAATTCTTTAA 515 Query 28771 TAATATACAGTTTGAACTCTGGAGAAATCCAACTAGCGAATTCAAATGCTATATCTTTAT 28830 | | | ||||| ||||| ||| | |||| | |||||||| |||||||| ||| Sbjct 516 TTAAAAGAAGTTTAAACTCAGGACTTAACCAAGACCCAAATTCAAAAGCTATATCGGTAT 575 Query 28831 GAGCATAAGTCCCTCCATATCGTCCGGATTTAGAAGTTATACCTATAGCTTTAGTTGTTT 28890 ||||| ||||||| ||||| || || | | | || || || || || || || ||| Sbjct 576 GAGCAAAAGTCCCACCATAACGACCTGCACTTGCCGTAATTCCAATTGCATTTGTCTTTT 635 Query 28891 CAATCCATTTTTTAGGAGTTAGGACAAAGCTATTCGATCCGGCTTGATTTTTAACCGCCT 28950 |||||||| ||| | | | || ||||| | || |||| |||||| ||| Sbjct 636 GAATCCATTGTTTTGCTGACATTGTGAATCTATTTAAACCAGCTTCTGTTTTAATTCCCT 695 Query 28951 CGAATTCGACACGGTTAAAATTAGAATTGTTTATATCTTCCCAAACTCCTAAAAACTCTA 29010 |||||||| ||||||| |||| |||| |||||||||| | | ||| || | Sbjct 696 CGAATTCGGGGGAATTAAAATCTTTGTTGTGCATATTTTCCCAAACTGCAAGAAATTCAA 755 Query 29011 TGGTACTTCTCGAACGTAA-CCAGTTTTGAATTAAA 29045 | ||| |||| | ||| ||| |||| ||||||| Sbjct 756 TTGTA-TTCTTGTTTCTAATCCACTTTTCAATTAAA 790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144778063284736