Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3301 125 7e-24 seq1514 109 5e-19 >seq3301 Length=512230 Score = 125 bits (138), Expect = 7e-24 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 71669 CAAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATT 71728 || || |||||||| | ||||| ||||||| ||||| || || || ||||| Sbjct 484186 CACACCCATGATGATTTGTGGAACTCTGCTCAAATTCAGCTGGTGAAGGAAGGGAAAATG 484127 Query 71729 CACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAG 71788 || |||| | |||||||||||||||| || || |||||||| |||||| | | || ||| Sbjct 484126 CATGGATTCTTACGCATGTACTGGGCAAAGAAAATTCTCGAATGGACTGTATCCCCAGAG 484067 Query 71789 CAGGCGCTCGAGTATT-CTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCC 71847 | || ||| || ||| | ||||| |||||||| | |||||||| || || | ||||| Sbjct 484066 GAAGCTCTC-AGAATTGCCATTTACTTAAACGATCGTTACAGTCTTGATGGCAGAGATCC 484008 Query 71848 TAACGGTTATGTCGGT 71863 ||| |||||||| ||| Sbjct 484007 TAATGGTTATGTGGGT 483992 >seq1514 Length=8380 Score = 109 bits (120), Expect = 5e-19 Identities = 193/277 (70%), Gaps = 7/277 (3%) Strand=Plus/Minus Query 148251 TCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAACCGGGACAC 148310 |||||| | |||||| || || ||| | | ||||||||||||| || || || || Sbjct 3868 TCGTAACGTGTGTAAAGCTCTTCAAATGCCTCGCCATAGCAATCGGCCAAGCCTGGGCAT 3809 Query 148311 TCGTCGGGGCACATCAATGACCATTTCCCTC-CTGTCTT-TACCCTCTTCATAAACAGAT 148368 |||| ||||||||| | ||||| | || | |||| |||| ||||||||| | || Sbjct 3808 TCGTTGGGGCACATTAGCGACCA--AACGTCGTTATCTTCCACCCGCTTCATAAATAAAT 3751 Query 148369 CAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTCGGCACCCATATTGC 148428 ||||| |||||||||| ||| |||||| ||||| ||| || || ||| || Sbjct 3750 CAGGTATCCACATGGCGTAAAAAAGATCACGAGCACGCATTTCTTCTTTACCGTGGTTTT 3691 Query 148429 GCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGATGTATACGGTCATGG 148488 ||| | | ||||| |||||| || || ||||||||||| | |||| || | | Sbjct 3690 TCTTCAATTGCAAAAGCTCAAAAACATCGGCATGCCAAGGCTCCAAATATATGGCAAATG 3631 Query 148489 CGCCTTTCCTTTT---ACCTCCTTGATCGACATGGCG 148522 ||| || | || |||||| ||||| |||| ||| Sbjct 3630 AGCCCTTGCGCTTGCCACCTCCCTGATCTACATAGCG 3594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478608335081920