Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1514 188 2e-42 seq2057 132 1e-25 >seq1514 Length=8380 Score = 188 bits (208), Expect = 2e-42 Identities = 602/920 (65%), Gaps = 18/920 (2%) Strand=Plus/Plus Query 363364 TATGAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTA 363423 ||||| | ||| | | |||||| ||| || | ||| || | || ||||| || || Sbjct 3153 TATGATAGAGATTTTGGTTATGATTATTTTGGCTTTAAAACACTCGAAAAATCATATCTT 3212 Query 363424 TCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATT 363483 | || |||| |||| | |||||||| ||||||||| | |||||||| ||| | Sbjct 3213 TTAAAAATTGATGGAAATATAGCAGAACGCCCACAGCATATGCTCATGCGTGTAGCTGTA 3272 Query 363484 GGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT 363543 ||||| ||| | ||| | || | || |||||||| ||||| | || | || Sbjct 3273 GGTATTCATGGTATAGATATCGACTCGGCCATTGAAACCTATAATTTACTTTCAGAGCGA 3332 Query 363544 GTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCT 363603 || || || ||||| || ||| | | |||||| || || | || |||||| | || Sbjct 3333 TGGTTTACCCATGCCACTCCCACATTATTCAATGCAGGTACACCAAAGCCACAGCTATCG 3392 Query 363604 TCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAG 363663 || |||||| | ||| ||||| ||||| || || || ||||| | || ||| | ||| Sbjct 3393 TCATGCTTTTTATTAACCATGAAAGACGACTCAATAGATGGTATTTACGATACATTAAAG 3452 Query 363664 AATTGTGCTCTTATTTCCAAGAAT--GCAGGCGGAATTGGTGTATCGATCCACAATGTTC 363721 | ||||| || || | ||| || || || ||||| || || || ||||| Sbjct 3453 CAATGTGCCAAAATATC--ACAATCGGCGGGTGGTATTGGCCTAAGCATACATAATGTAA 3510 Query 363722 GTGC-ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATG 363780 | || || | || | || || ||| || || || || | | || ||| Sbjct 3511 GGGCCACTGGTTCGT-ATATAAAAGGTACAAATGGCACTTCAAACGGCATAATACCAATG 3569 Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGG 363840 | || || || | |||| || | || || || ||||| || || |||||||| || Sbjct 3570 TTGCGGGTATTCAATGATACCGCTCGCTATGTAGATCAGGGAGGTGGCAAGCGCAAGGGC 3629 Query 363841 GCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGG 363900 | ||||| || ||| | |||||| ||||||||| |||||||| || | | | | Sbjct 3630 TCATTTGCCATATATTTGGAGCCTTGGCATGCCGATGTTTTTGAGCTTTTGCAATTGAAG 3689 Query 363901 AAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCT 363960 |||||| || ||||| ||| ||||||| |||||||| || || || | ||| | || Sbjct 3690 AAAAACCACGGTAAAGAAGAAATGCGTGCTCGTGATCTTTTTTACGCCATGTGGATACCT 3749 Query 363961 GACCATTTTATGAAGCGCGTGGAGGCAGGTAA-GA--ATTGGTCACTCTTTTGCCCACAC 364017 || ||||||||||| ||||| || ||| || |||||| || | ||||| || Sbjct 3750 GATTTATTTATGAAGCGGGTGGA---AGATAACGACGTTTGGTCGCTAATGTGCCCCAAC 3806 Query 364018 GAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTAT 364077 ||||| ||||| | ||||| | || || | | || | || ||| | || Sbjct 3807 GAATGCCCAGGCTTGGCCGATTGCTATGGCGAGGCATTTGAAGAGCTTTACACACGTTAC 3866 Query 364078 GAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 ||| || ||||| | ||||| || | || || | ||||||||| || || Sbjct 3867 GAAAGAGAAGGAAAAGTACGTAAAACGGTAAAAGCCCAAGACTTATGGTTTGAAATATTG 3926 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAAC-CG-CA 364195 || || || || || || |||||||| ||| | | |||||| | |||| || | Sbjct 3927 GAAAGCCAAATGGAAACTGGCACACCCTACATGCTATTTAAAGATGCAGCCAACTCGAAA 3986 Query 364196 AGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATT 364254 ||| ||||| | ||||||| || | | | || | ||||| ||||| || || || Sbjct 3987 AGT--AACCAAAAAAACCTTGGCACCA-TAAAAAGCTCAAACCTTTGTACTGAAATAATG 4043 Query 364255 GAATACACCGCTCCCGACGA 364274 ||||| || ||||| ||||| Sbjct 4044 GAATATACTGCTCCTGACGA 4063 >seq2057 Length=842785 Score = 132 bits (146), Expect = 1e-25 Identities = 215/306 (70%), Gaps = 5/306 (2%) Strand=Plus/Minus Query 364120 CTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAA 364179 || |||| |||||||| | || ||| | || ||||| || ||||| ||| | |||||| Sbjct 607941 CTGTGGTACGCCATCATTCAGTCCCAGGTGGAAACAGGCACTCCCTACATGCTCTACAAA 607882 Query 364180 GATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTA 364239 ||| | |||||||||||||||||||| ||| ||||||| || || || ||||| || Sbjct 607881 GATGCATGCAACCGCAAGTCCAACCAACAGAACCTTGGCACCATCAAGTGCAGCAATCTC 607822 Query 364240 TGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCG 364299 || || |||||| | || |||| | |||| || ||| || || ||||||||||| || Sbjct 607821 TGCACTGAGATTGTGGAGTACAGCTCTCCTGATGAGGTGGCAGTGTGTAACCTTGCTTCC 607762 Query 364300 ATCGCGCTTCCGGCGTTTGTAAA---AGATGGTACTTTTGACCACCAGCATCTTTAT-GA 364355 |||| || || ||| || ||| |||||| ||| ||||| | || || || Sbjct 607761 CTCGCTCTCAACATGTATGTCAAGCCAGACCGTACTTACGACTACCAG-AAGTTGATGGA 607703 Query 364356 CGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAAT 364415 || ||| | || ||| ||| ||| ||||| | || || ||||| || || || Sbjct 607702 AGTTACCAAAGTGGCCACTCTCAACCTCAACAAGATCATTGATGCCAATTACTACCCCAT 607643 Query 364416 TCCTGA 364421 || || Sbjct 607642 CCCAGA 607637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303202705866152