Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1514 100 2e-16 seq3957 84.2 2e-11 >seq1514 Length=8380 Score = 100 bits (110), Expect = 2e-16 Identities = 190/276 (69%), Gaps = 13/276 (5%) Strand=Plus/Minus Query 133001 TCGTAACTTTCGTATAATCGCT-CAAATTCTTCGCCATAGCAGTCGTTCAAACCGGGACA 133059 ||||||| | ||| || | || ||||| | ||||||||||| ||| ||| || || || Sbjct 3868 TCGTAACGTGTGTA-AAGCTCTTCAAATGCCTCGCCATAGCAATCGGCCAAGCCTGGGCA 3810 Query 133060 CTCGTCAGGACACATCAATGACCA----TTTTTCTCCTGCGCTCACCCTTTTCATGAACA 133115 |||| || ||||| | ||||| | || || | | |||| ||||| || | Sbjct 3809 TTCGTTGGGGCACATTAGCGACCAAACGTCGTTATCTTCC----ACCCGCTTCATAAATA 3754 Query 133116 ACGAAGGTGTCCACATGGCAAAAAATAAATCGCGAGCCTTCATATCTTCCGCGCCCATAT 133175 | |||| |||||||||| |||| | ||| ||||| ||| ||||| || | Sbjct 3753 AATCAGGTATCCACATGGCGTAAAAAAGATCACGAGCACGCATTTCTTCTTTACCGTGGT 3694 Query 133176 TTCGTTTCAAGTCCaaaaaagtaaaaaTGTCTGCATGCCAAGGCTCGATATATACGGCCA 133235 || ||||| | ||||| ||||| || |||||||||||||| | ||||| ||| | Sbjct 3693 TTTTCTTCAATTGCAAAAGCTCAAAAACATCGGCATGCCAAGGCTCCAAATATATGGCAA 3634 Query 133236 AAGCGCCTTTCCTTTT---ACCTCCCTGATCCACAT 133268 | | ||| || | || |||||||||||| |||| Sbjct 3633 ATGAGCCCTTGCGCTTGCCACCTCCCTGATCTACAT 3598 >seq3957 Length=668572 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||||||||| | || |||||||||||||| || || | || ||| | || || ||| | Sbjct 478683 CAAAATGCAGATCTTCGTAAAAACATTAACAGGGAAGACCATAACCTTAGAGGTTGAGCC 478742 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||||| ||||| | || || ||||| |||||||| ||||| || || || Sbjct 478743 TTCAGACACAATCGATAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATTCCACCTGA 478802 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 ||| ||| ||||||| | || ||||| || || || |||| Sbjct 478803 TCAGCAGCGACTGATCTTCGCTGGCAAACAGCTTGAGGATG 478843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429888652760580