Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1112 105 6e-18 seq3957 86.0 6e-12 seq2057 86.0 6e-12 >seq1112 Length=3255245 Score = 105 bits (116), Expect = 6e-18 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || || || || | ||| || ||||| ||||| ||||| ||| | |||||| ||| Sbjct 2620700 AGAACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAGTCGGAAAGGGTGCGGCCATCC 2620759 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || ||||||||||||||| |||| || ||||||||||| || ||||||||||| ||||| Sbjct 2620760 TCAAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCC 2620819 Query 131143 GTGATTTT 131150 |||||| Sbjct 2620820 TGGATTTT 2620827 Score = 96.9 bits (106), Expect = 3e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || || || || | ||| || ||||| ||||| ||||| || | ||||| ||| Sbjct 2622957 AGAACCAAGTGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAGAGTGTGCGGCCATCC 2623016 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || ||||||||||||||| |||| || ||||||||||| || ||||||||||| ||||| Sbjct 2623017 TCAAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCC 2623076 Query 131143 GTGATTTT 131150 |||||| Sbjct 2623077 TGGATTTT 2623084 Score = 89.7 bits (98), Expect = 5e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 131047 TTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATT 131106 || |||||||| || || | ||||||| ||||| ||||||||||||||| |||| Sbjct 2620093 TTCTGAATGTTATAGTCTGAGAGGGTGCGCCCATCCTCAAGCTGCTTGCCTGCGAAGATC 2620152 Query 131107 AAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 || ||||| ||||| || ||||||||||| ||||| |||||| Sbjct 2620153 AAGCGCTGTTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATTTT 2620196 >seq3957 Length=668572 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/194 (70%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 131042 ACTCCTTT-TGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCG 131100 || ||||| ||||||||||| || || ||||| ||||| ||||| ||||| ||| Sbjct 478880 ACACCTTTCTGAATGTTGTAGTCTGACAATGTGCGACCATCCTCAAGCTGTTTGCCAGCG 478821 Query 131101 TAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC 131160 |||| | |||||||| || || || || || |||||||| ||| || ||| | Sbjct 478820 AAGATCAGTCGCTGCTGATCAGGTGGAATGCCCTCTTTGTCTTGGATCTTGGCCTTCACA 478761 Query 131161 TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTT 131220 | || | || || | | ||| | || | ||| | ||| || || |||| |||||| Sbjct 478760 TTATCGATTGTGTCTGAAGGCTCAACCTCTAAGGTTATGGTCTTCCCTGTTAATGTTTTT 478701 Query 131221 ACGAAAATCTGCAT 131234 ||||| |||||||| Sbjct 478700 ACGAAGATCTGCAT 478687 >seq2057 Length=842785 Score = 86.0 bits (94), Expect = 6e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 145619 TTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACG 145678 |||| |||| || || | ||||| |||||| ||| || | |||||| | || Sbjct 607751 TTGAGAGCGAGGGAAGCAAGGTTACACACTGCCACCTCATCAGGAGAGCTGTACTCCACA 607810 Query 145679 ATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTG 145738 ||||| | ||| | |||||| || |||||||| || || || || || || || | | Sbjct 607811 ATCTCAGTGCAGAGATTGCTGCACTTGATGGTGCCAAGGTTCTGTTGGTTGGACTTGCGG 607870 Query 145739 TTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTG 145785 ||||| || || |||||||||||||| || ||| || |||||||| Sbjct 607871 TTGCATGCATCTTTGTAGAGCATGTAGGGAGTGCCTGTTTCCACCTG 607917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471959486154240