Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq2502 91.5 2e-13 >seq2502 Length=269351 Score = 91.5 bits (100), Expect = 2e-13 Identities = 147/206 (71%), Gaps = 8/206 (4%) Strand=Plus/Plus Query 126179 TGGTGTAAATGTAGCGGGGAGCTGCC-GAATCCTTGCCTCCCTCCAACCGCGTGCCAAAC 126237 ||||| | ||||| ||||| |||| | | ||||||||||||| || ||||| |||||| Sbjct 88685 TGGTGAAGATGTAACGGGG-GCTGGCAGCGTCCTTGCCTCCCTGCAGACGCGTACCAAAC 88743 Query 126238 TGACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTG 126297 ||||||| ||| || | | | ||||||| || || ||| |||||| | ||| Sbjct 88744 TGACCGTTGGGCAGCAGGAGGTTGATGTTGTTGGAGCCGACGTAGTTCTGCGCCAGGTTG 88803 Query 126298 ACAATGGTCTCGCACAGGTTC--TGC-TCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACG 126354 | ||||| | ||| | | || || ||||| | ||| | | |||||||||||| Sbjct 88804 ATGATGGT---GGACATGAGCGAGGCTTCACCGTGGTGGTACGCAGAGTGCTCGGCCACG 88860 Query 126355 TAGCCGCTCAGCTGCGCAACCTTGAT 126380 |||| ||||||||| |||||||| Sbjct 88861 GAGCCAGCCAGCTGCGCGACCTTGAT 88886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611322943273600