Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= NC_008194.1
Length=74483
Score E
Sequences producing significant alignments: (Bits) Value
seq4979 250 1e-61
seq2001 161 5e-35
seq2100 96.9 2e-15
>seq4979
Length=1283317
Score = 250 bits (276), Expect = 1e-61
Identities = 550/824 (67%), Gaps = 3/824 (0%)
Strand=Plus/Minus
Query 65405 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTG 65464
||||| || ||| | |||| || |||||| |||| || ||| | ||||||||
Sbjct 188377 ACCGGTTCCCTCGGTTTGGATATTGCGCTGGGCGTCGGTGGCCTGCCGCGTGGCCGGGTT 188318
Query 65465 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTATGTCTCCACGCGGTGGCC 65524
|| |||||||| || || ||||| || || ||| | || || || || || | || |||
Sbjct 188317 GTCGAAATCTATGGTCCGGAATCGTCCGGCAAGACCACGCTCTGCCTGCAGGTCGTCGCC 188258
Query 65525 AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCT 65584
| ||||||| ||| || || |||| || || || || || | || || ||
Sbjct 188257 GAAATGCAGAAGCTCGGCGGGGTTGCTGCCTTTATTGATGCCGAACATGCGCTCGATCCG 188198
Query 65585 GAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACT 65644
| || ||| || ||||| || | ||| | |||| || | || ||||| ||
Sbjct 188197 CAATATGCCCAGAAACTCGGCGTCAATGTCGGCGACCTGCTGATCTCGCAACCGGATACC 188138
Query 65645 GGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTC 65704
||||| ||||| || || |||| ||| | || || ||| || | | |||| |
Sbjct 188137 GGCGAACAGGCGCTCGAAATCGCCGACATGCTGGTGCGGTCCGGGTCGGTCGACATCATT 188078
Query 65705 GTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGAC 65764
||| ||||||| ||||| || || ||||| ||||| |||| ||||| || || |||
Sbjct 188077 GTCATTGACTCCGTGGCCGCGCTCACCCCGCGTGCCGAAATCGAGGGCGAGATGGGCGAC 188018
Query 65765 AGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACC 65824
|| || ||||| || ||||| ||| ||||| |||||||||| || | || |
Sbjct 188017 CAGATGGTTGGGCTGCATGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCAAC 187958
Query 65825 ATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAAC 65884
||| | ||||| |||||| ||| |||||||| | ||| ||||||||| |
Sbjct 187957 ATCAAGAAGACCAATACGCTGGTTGTCTTCATCAACCAGATCCGCATGAAGATCGGTGTC 187898
Query 65885 GTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCA 65944
|| | |||| || || |||||||| || ||||| || | | ||| ||||| ||
Sbjct 187897 ATG---TTCGGCTCGCCGGAAACCACCACCGGTGGCAATGCGCTCAAGTTTTACGCTTCG 187841
Query 65945 GTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAAC 66004
|| ||| | || | || || |||| | | ||| | ||||| || | | |||||| |
Sbjct 187840 GTGCGCCTCGACATTCGCCGTATCGGCGCGATCAAGAAGGGCGACGAAGTTATCGGCAGC 187781
Query 66005 CGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTC 66064
||| ||| |||||||||||||||||| | || || || |||| | ||| |||
Sbjct 187780 GAAACCAAGGTCAAGGTCGTCAAGAACAAGGTCGCGCCCCCCTTCCGCGAAGCCATCTTC 187721
Query 66065 TCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCG 66124
| || | ||||| ||||| ||||| || ||| |||| || |||| ||| || ||
Sbjct 187720 GACATCCTCTACGGTGAGGGAATCTCCCGACAGGGCGAAGTCGTCGAAATGGGTGTCGCG 187661
Query 66125 CAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCTCAG 66184
|| ||||| | || || || ||||||| | ||| || | |||| | | |||
Sbjct 187660 CACAAGCTGGTCGACAAATCAGGTGCCTGGTACGCCTACAAGGGCGAGAAAATTGGCCAG 187601
Query 66185 GGCAAGCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCGGACAT 66228
|||||| ||| ||| | ||| |||||||| |||| || ||
Sbjct 187600 GGCAAGGACAATGCCCGCGAGTTTCTCAAGGCACACCCAGAGAT 187557
>seq2001
Length=3286380
Score = 161 bits (178), Expect = 5e-35
Identities = 428/647 (66%), Gaps = 9/647 (1%)
Strand=Plus/Plus
Query 65421 TGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCC 65480
||||| ||| || || ||||||| | ||| | || |||||| | || || | ||||
Sbjct 2301338 TGGACATCGCGCTCGGAGTCGGGGGCTTGCCGCGCGGACGGGTGATTGAGATTTTTGGCC 2301397
Query 65481 CAGAATCTTCAGGGAAGTCAACTCTATGTCTCCACGCGGTGGCCAATGCGCAGAAGGCCG 65540
| || || || || ||| | || | ||||| | ||| | | |||||| |||
Sbjct 2301398 CGGAGTCGTCCGGCAAGACGACGATGACGCTCCATTGTATTGCCGAGGTTCAGAAGACCG 2301457
Query 65541 GTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG-TACGCCAAGGCG 65599
| ||| || |||| |||||| || || || ||||||| ||| || ||| | |
Sbjct 2301458 GCGGCGTGGCGGCCTTCATCGATGCGGAACATGCCCTGGATT-TGACCTATGCCCAAAAG 2301516
Query 65600 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 65659
|| || ||| | || | | | ||| |||||||| || |||||||||||| ||
Sbjct 2301517 CTGGGAGTGCAGGCAGATGAGTTGCTTGTGTCCCAGCCGGATACCGGCGAGCAGGCCTTG 2301576
Query 65660 GAGATCGTTGACCTCCTCGTCA--AGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTG 65717
|| |||| ||| || || ||| |||| | | || | |||| || || || |
Sbjct 2301577 GAAATCGCTGAGACGCTGGTTCGCAGTGGAGCGATC-GACC-TGATCGTGGTGGATTCGG 2301634
Query 65718 TGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCC 65777
| || || || ||| || || || |||||||||| || || || ||| | |||
Sbjct 2301635 TCGCCGCGCTCACGCCACGGGCTGAAATCGAAGGCGAAATGGGCGATTCTCATATGGGCT 2301694
Query 65778 TGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCA 65837
|||| ||||| ||||||||||||||| |||| ||||| || | | ||||| | |
Sbjct 2301695 TGCAGGCGCGGCTCATGTCGCAGGCCTTGCGTAAGCTGACGGCTGCTATCTCGAAGTCTC 2301754
Query 65838 ACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCC 65897
| ||| | | | |||||||| | ||| |||||| || ||| | ||||
Sbjct 2301755 AGACGACATTGATTTTCATCAACCAGATCCGCATGAAGATTGG---GGTGATGTTCGGCA 2301811
Query 65898 CGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATG 65957
||| ||||| || ||||| || || |||| |||||| |||| || ||| | |||
Sbjct 2301812 ATCCCGAAACCACGACCGGCGGGAATGCGTTGAAGTTCTATTCCTCGGTTCGCCTTGATA 2301871
Query 65958 TCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGA 66017
| || ||||||| | | || || || | || | | || ||||| |||||||
Sbjct 2301872 TTCGCCGCATCGAGTCTGTAAAAGAGGGGCAGGATGTGATGGGGAACCGGGTGCGGGTGA 2301931
Query 66018 AGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTC 66064
|||||||||| |||||| |||| |||||| ||| | || ||||||
Sbjct 2301932 AGGTCGTCAAAAACAAGATGGCGCCGCCGTTTCGCCAGGCGGAGTTC 2301978
>seq2100
Length=6174
Score = 96.9 bits (106), Expect = 2e-15
Identities = 184/271 (68%), Gaps = 0/271 (0%)
Strand=Plus/Minus
Query 65400 TTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCC 65459
|| ||||||| || | | || ||| ||| ||||| | || || ||| | ||||
Sbjct 289 TTTCCACCGGGTCCCTGGGGCTTGACATCGCCCTGGGAGTGGGCGGCCTGCCGCGCGGCC 230
Query 65460 GGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTATGTCTCCACGCGG 65519
| ||||| |||||||||||||| |||||||| || ||| | || || || || | |
Sbjct 229 GCGTGGTCGAAATCTACGGCCCGGAATCTTCGGGCAAGACCACGCTCACGCTGCAGGTGA 170
Query 65520 TGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGG 65579
| ||| | ||| ||| ||| ||| ||||| |||||| || || ||| | || |
Sbjct 169 TCGCCGAGATGCAAAAGCTCGGCGGCGTGTGCGCCTTCATCGATGCCGAACACGCGCTCG 110
Query 65580 ACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGG 65639
| | | ||||| | |||||| ||| |||| | |||| | | ||||| |
Sbjct 109 ATACGCAATACGCGCAAAAGCTCGGCGTGAACCTGCAAGACCTGCTCATCAGCCAGCCCG 50
Query 65640 ACACTGGCGAGCAGGCCCTGGAGATCGTTGA 65670
|||| ||||||||||| ||||| ||||| ||
Sbjct 49 ACACCGGCGAGCAGGCACTGGAAATCGTCGA 19
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 238194565636624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |