Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq6036 742 0.0 >seq6036 Length=8020 Score = 742 bits (822), Expect = 0.0 Identities = 765/1001 (76%), Gaps = 0/1001 (0%) Strand=Plus/Plus Query 166045 TGGGAATCCTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTT 166104 |||||| ||||| | ||| |||| ||| | |||||| | || | ||||||||| Sbjct 33 TGGGAACGTTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTT 92 Query 166105 GGCACACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGTTTCATCGTCGCTTTCGTA 166164 || | ||| | || || | || ||||||| |||| |||| |||| ||| | Sbjct 93 GGTTGTTTAATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCATTCATC 152 Query 166165 GCGGCACCTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTAT 166224 || || ||||| || ||||||||||| ||||||||||| |||||||| || || | || Sbjct 153 GCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTATTATAC 212 Query 166225 GGTAACAACATCATCTCTGGTGCTGTTGTCCCCTCCTCCAACGCAATTGGTCTTCACTTC 166284 ||||||||||||||||||||||| ||| |||| || ||||| || ||| | |||||| Sbjct 213 GGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATGCACTTC 272 Query 166285 TATCCCATCTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAG 166344 || || || ||||||||||| ||| | ||||| ||| | || ||||||||||||| ||| Sbjct 273 TACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCTTACCAA 332 Query 166345 CTCGTAGTCTTCCACTTCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTG 166404 | | || | |||||| | | || | | ||||||||||||||||||||||| Sbjct 333 TTAATCGTTTGTCACTTCTTATTAGGAGTAGCATCTTACATGGGTCGTGAATGGGAATTA 392 Query 166405 TCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCA 166464 |||||||| | ||||||||||||||||| | |||||| | |||||| || || |||||| Sbjct 393 TCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCAGTAGCAGCA 452 Query 166465 GCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCC 166524 || || ||||| ||| | || || || | ||||||||||| |||||||| | ||||| Sbjct 453 GCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGATGGTATGCCT 512 Query 166525 CTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTC 166584 | ||||| ||| || ||||||| |||| | || |||||||| ||||||||||| | Sbjct 513 TTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCACAACATTTTA 572 Query 166585 ATGCACCCCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCA 166644 |||||||| ||||| ||| ||||| || |||||||| ||||| || | ||||| || Sbjct 573 ATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTATTCTCAGCT 632 Query 166645 ATGCACGGCAGTCTCGTTACTTCCTCGCTCGTCCGTGAGACCACTGAAACTGAGTCTCAA 166704 |||||||| | || ||||| || | | ||||| || ||||||| || || Sbjct 633 ATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGCGAATCAACT 692 Query 166705 AACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGT 166764 ||||| |||||||| || |||||||||||||| || ||||||||||| || ||||| ||| Sbjct 693 AACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCACGGT 752 Query 166765 TACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTC 166824 ||||||||||| | ||||||||||||||||| |||||||||||||| | | |||||| Sbjct 753 TACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCTTTACACTTC 812 Query 166825 TTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATG 166884 ||| | || |||||| ||| | ||||||||||| |||||| | ||| |||| || ||| Sbjct 813 TTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATTAGTACTATG 872 Query 166885 GCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTG 166944 || |||||| | |||||||||||||||||||| || | | ||| || |||||||| Sbjct 873 GCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTA 932 Query 166945 CTCAACACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAG 167004 ||||||||||||| ||| || | |||||||||| | | |||||||||||||||||||| Sbjct 933 ATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTAATGCACGAA 992 Query 167005 CGTAATGCTCACAACTTCCCTCTGGATCTTGCTGCTGCTGA 167045 ||||| || ||||||||||| | ||| | ||| | | ||| Sbjct 993 CGTAACGCGCACAACTTCCCATTAGATTTAGCTTCAGGTGA 1033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567167931145600