Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq890 118 1e-21 seq1813 111 2e-19 >seq890 Length=977872 Score = 118 bits (130), Expect = 1e-21 Identities = 79/87 (91%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| ||| |||||||||||| ||||| |||||||||| |||||| Sbjct 325913 AGTCAGGTTGGCCGAGCGGTTTAAGGCGCCAGACTTAAGTTCTGGTTCCCGAGAGGGAGC 325854 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 325853 GTGGGTTCGAACCCCACACCTGACAAA 325827 >seq1813 Length=735787 Score = 111 bits (122), Expect = 2e-19 Identities = 144/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| || | ||| | |||| |||||||| || ||||| |||||||| || || ||| Sbjct 439186 ATGTAGGTGTTGATGAGCAGACTGTACATTTCTGAGTGGACGTTCTCCATGGCGATCTGG 439127 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || || ||||| || | |||||||| | |||||| || || || ||||| || || Sbjct 439126 AAGCCATAGAAGCAGCGAGCTTCCGGCACCTGCACCTCCTGGCTGAACCTCTCCACCAGG 439067 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || |||||||| || || || || || || || || ||||| | || || |||||| Sbjct 439066 TTCTCATTGACGATGCCGTCAGACGCAGCGAAGAACGCCAACACGTGGGAGATGAAATGT 439007 Query 93542 TTCTCATCAT-CTTTAAG 93558 ||||| || | ||| ||| Sbjct 439006 TTCTCCTCTTGCTTCAAG 438989 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 ||||||||||| ||||| || ||||||| || || ||||| || || |||||||| | | Sbjct 438262 TTTGAAAGATCCACTTCCTCTGCAGTCCAGAATGAAGCTTCCGCCTTCTTGTACATCTGC 438203 Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAAC 93700 || ||||| || | || || || || || ||||||||| |||||| ||||| || | Sbjct 438202 CAAATGTCATGGAACTGGATGGGGAAGATCACAAAACGAGAAGGGTTGTCTTTCAGCAGG 438143 Query 93701 GGCTCTAGTT 93710 || || |||| Sbjct 438142 GGTTCCAGTT 438133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556797902572640