Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_008689.1 Length=44857 Score E Sequences producing significant alignments: (Bits) Value seq5360 93.3 1e-14 >seq5360 Length=5598 Score = 93.3 bits (102), Expect = 1e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 40995 TAAATATGAAGAACAAAAATCGATTCTTAAAGATAGAAATAGCTTTTCTAAAACTGATCA 41054 |||||||| |||||| || || | | | |||||||| | | ||||| ||| | Sbjct 967 TAAATATGCCGAACAAGAAAAAATATTAGATGGAAGAAATAGTTATAGCAAAACCGATGA 908 Query 41055 TGATGCAACTTTTATGAGAATGAAGGAAGACCATATGAAAAATGGCCAACTTAAGCCAGG 41114 ||||| || |||||||||||||| || || |||||| ||||||| ||| | || ||||| Sbjct 907 AGATGCCACCTTTATGAGAATGAAAGAGGATCATATGCAAAATGGACAATTAAAACCAGG 848 Query 41115 ATACAATTTACAAATA 41130 || ||| |||||||| Sbjct 847 CTATAATGTACAAATA 832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143405410589608