Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2057 132 9e-26 seq1813 125 1e-23 >seq2057 Length=842785 Score = 132 bits (146), Expect = 9e-26 Identities = 124/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 244664 ACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTG 244723 ||| || |||||| |||| | || ||||| || || |||||||| || | | || Sbjct 607742 ACATACATGTTGAGAGCGAGGGAAGCAAGGTTACACACTGCCACCTCATCAGGAGAGCTG 607801 Query 244724 TACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTG 244783 |||| |||||||| |||||||| || ||||||||||||||||| |||| ||| || ||| Sbjct 607802 TACTCCACAATCTCAGTGCAGAGATTGCTGCACTTGATGGTGCCAAGGTTCTGTTGGTTG 607861 Query 244784 GACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGG 244821 |||||| |||||| || || |||||||||||| |||| Sbjct 607862 GACTTGCGGTTGCATGCATCTTTGTAGAGCATGTAGGG 607899 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 244970 GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029 |||||||| | |||||| | || | || ||||||||||||||| || || |||||| Sbjct 608368 GGGCACATCAAACTCCATACCCCATTGCTCTCGACCCTCTGCATGAACAGATCTGGGATC 608427 Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGC 245089 || | ||| | ||| || || || | | | || ||| ||||||||| ||| | || Sbjct 608428 CACAAGGCATAGAACAGATCTCTAGCTCGCACTTCCTCCTTGCCAGTGTTTTTCTTTAGG 608487 Query 245090 TCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTC 245124 |||| || ||||||| ||| | ||||| ||||| Sbjct 608488 TCCAGGAATTCAAAGATGTCTGCATGCCATGGCTC 608522 >seq1813 Length=735787 Score = 125 bits (138), Expect = 1e-23 Identities = 127/164 (77%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 |||| |||||||| || ||||||||||| |||||||||||||||| ||||||| Sbjct 439027 TGGCGTTCTTCGCTGCGTCTGACGGCATCGTCAATGAGAACCTGGTGGAGAGGTTCAGCC 439086 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 | ||||||||| || || ||||||||||| ||||||||||| ||||| ||||||| Sbjct 439087 AGGAGGTGCAGGTGCCGGAAGCTCGCTGCTTCTATGGCTTCCAGATCGCCATGGAGAACG 439146 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGC---TCAACACGTACATC 42584 | ||||| || |||| || |||| ||||||| |||||| Sbjct 439147 TCCACTCAGAAATGTA---CAGTCTGCTCATCAACACCTACATC 439187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944232536887360