Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_009603.1 Length=46365 Score E Sequences producing significant alignments: (Bits) Value seq2001 87.8 5e-13 >seq2001 Length=3286380 Score = 87.8 bits (96), Expect = 5e-13 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42807 CGCCGAAGCGCAGGGCGTCCATGACCGCGACCGGGCGAGCGCCCATGGAGATGATGTCGC 42866 ||||||||||||| | |||| | || | ||| || || ||||| | | | |||| Sbjct 2912242 CGCCGAAGCGCAGCGAATCCAGTAAGGCAATCGGCCGCGCCCCCATCGTAAACACATCGC 2912301 Query 42867 GGACGATGCCGCCCACACCCGTCGCCGCGCCCTGGAAGGGCTCGATGAACGAGGGGTGGT 42926 | | || || || || || |||||||||||||| ||||||||||||| || || |||| Sbjct 2912302 GCAGAATCCCACCTACGCCGGTCGCCGCGCCCTGATAGGGCTCGATGAATGACGGATGGT 2912361 Query 42927 TGTGACTCTCCGCCTTGAACGTGACCGCCCA-TCCCTCGCCGACGTCGATGACGCCCGCG 42985 | || |||| ||||||| || ||| | ||| ||||||| || | ||||| || Sbjct 2912362 TATGGGACTCCATCTTGAACACGA-CGCAGAGTCCATCGCCGATATCCACCACGCCGGCA 2912420 Query 42986 TT 42987 || Sbjct 2912421 TT 2912422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148230492790664