Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq5144 107 4e-18 >seq5144 Length=4231 Score = 107 bits (118), Expect = 4e-18 Identities = 221/329 (67%), Gaps = 0/329 (0%) Strand=Plus/Minus Query 68421 GAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACTCCGTTTTATCCTCGA 68480 ||| ||||||| ||||| |||||||| |||| ||||| || || || || || || Sbjct 1653 GAGCTGTATGGCCTGGTGCAGGAAATTCCGCAGAAGGAAACCACGCCCTTCTACCCGCGC 1594 Query 68481 AGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAAAAATTACCGTGAGTCG 68540 ||||| |||| || || ||| |||| | || |||||| |||||||| ||| | Sbjct 1593 AGCCCCTACGCCGTGGCCAAGCTGTATGGCTACTGGATCACGGTGAATTACCGCGAGGCC 1534 Query 68541 TATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAGTCCCAACAGAGGCCAT 68600 ||| | |||||| |||||| || ||||| ||||| || || | ||| | Sbjct 1533 TATGGCCTGTATGCCTGCAACGGCATCCTGTTCAACCACGAAAGCCCGCTGCGTGGCGAG 1474 Query 68601 CAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTTCAATGGTGTCGAAAAA 68660 ||||||||| || || ||||| | || ||| || | | || | || | Sbjct 1473 ACGTTCGTGACGCGCAAGATCACCCGCGCCGTGGCGCGCATCGCCCACGGCCTGCAAGAC 1414 Query 68661 TGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTACGTA 68720 ||| |||| || || || | ||||| | |||||||| ||||| || ||||| Sbjct 1413 TGCCTGTACCTGGGCAACCTGAGCGCCAAGCGCGATTGGGGCCATGCGCGTGACTACGTT 1354 Query 68721 GAAGCAATGTGGTTGATGCTGCAACAAGA 68749 ||||| |||| |||||||||||||||| Sbjct 1353 GAAGCGCAGTGGCTGATGCTGCAACAAGA 1325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102752315446600