Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_011023.1 Length=52892 Score E Sequences producing significant alignments: (Bits) Value seq6624 91.5 5e-14 >seq6624 Length=42116 Score = 91.5 bits (100), Expect = 5e-14 Identities = 84/105 (80%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 43767 CCGT-CTTGCGGATCGTCGGCAGAACCTCCGACGTGACCCACTTGCGGAACGCCTTCGCC 43825 |||| ||||||||||| ||||| ||||| | || |||||||||||||| | ||| || Sbjct 22033 CCGTGCTTGCGGATCGAGGGCAGCACCTCGGCAGTCACCCACTTGCGGAAGGGCTTGGCT 21974 Query 43826 TGCGGCTTGTCGCTGCGGACGATGAGCGCGTACAGACCGGACTCG 43870 || ||||||| |||||||| ||| || | ||| || || |||||| Sbjct 21973 TGGGGCTTGTTGCTGCGGATGATCAGGGTGTAAAGGCCTGACTCG 21929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169114651627728