Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_011041.1 Length=137947 Score E Sequences producing significant alignments: (Bits) Value seq4979 131 1e-25 >seq4979 Length=1283317 Score = 131 bits (144), Expect = 1e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 133682 GTAATAGCGGAAGCCACCGCCACCTTGCCAGCTTGCAGACTTAGAAATACCACCTTGATC 133741 ||| || || ||||| ||||| |||||||| || | | || | ||| || |||| || Sbjct 966284 GTAGTAACGAAAGCCCCCGCCGCCTTGCCAATTTACCGCCTCACTAATGCCGCCTTTGTC 966343 Query 133742 TTCACCATCAATCACTTTTTGCAAGCGAGGGATAATATGGGTATGACAATGATCACCCAG 133801 ||| |||||||||||||| | || ||| ||||| || || ||||| ||||| ||||||| Sbjct 966344 TTCGCCATCAATCACTTTCTTCAGGCGCGGGATGATGTGCGTATGGCAATGCTCACCCAA 966403 Query 133802 TTCGATCAAGATCCAACGTCTTTTCATCTTGTGGGCTACAGCAGCAGTAGTTCCCGAACC 133861 || |||| |||||| || | |||||||||||| || || | || || || ||||| Sbjct 966404 CTCAATCATGATCCAGCGCCGACCCATCTTGTGGGCGACCGCGCCGGTGGTGCCGGAACC 966463 Query 133862 GCCGAATGAATC 133873 | |||| || || Sbjct 966464 GGCGAAGGAGTC 966475 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 134646 CGAATTATTTCTAACCTATCCCTCATTAAGCCCAGCCAAACGGAATGCTCCAGGCTATCA 134705 ||||| || || | || ||||| ||| || |||||||||| ||||||||||| | ||| Sbjct 967149 CGAATAATCTCCAGCCGATCCCGCATCAACCCCAGCCAAATCGAATGCTCCAGCCCATCG 967208 Query 134706 TCGTAGTGCTCAAAAGCCCTCCCGGTATTGAATGGTGGGTCTATGTAAACACACTTCACT 134765 ||||| ||| ||| || ||||| || || | || || || || | ||||||||||| Sbjct 967209 TCGTAATGCGTAAACGCGCTCCCCGTGTTATACGGCGGATCAATAAACACACACTTCACC 967268 Query 134766 TTGCCTGCATACTCTTGCTCTAGCGCCTTCAATGCTAATAAGTTATCTCCAAAAATCAGT 134825 || | | |||| ||| |||||||| || || | |||||||| ||||||||||| Sbjct 967269 CGCCCCGAAAACTCCGCCTCCAGCGCCTTTAACGCCAGCAAGTTATCCCCAAAAATCAGC 967328 Query 134826 TTATTATCAAAAATATC 134842 ||||||||||| ||| Sbjct 967329 CGATTATCAAAAACATC 967345 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133682 GTAATAGCGGAAGCCACCGCCACCTTGCCAGCTTGCAGACTTAG-AAATACCACCTTGAT 133740 ||| ||||||||||| ||||| || | |||||| | | ||| | || || ||||| | Sbjct 7865 GTAGTAGCGGAAGCCGCCGCCGCCCTTCCAGCTAACCG-CTTGGCTGATGCCGCCTTGGT 7923 Query 133741 CTTCACCATCAATCACTTTTTGCAAGCGAGGGATAATATGGGTATGACAATGATCACCCA 133800 | || || || || ||||||| || || || || || || ||||| || || || |||| Sbjct 7924 CCTCGCCTTCGATGACTTTTTTCAGACGCGGAATGATGTGCGTATGGCAGTGCTCGCCCA 7983 Query 133801 GTTCGATCAAGATCCAACGTCTTTTCATCTTGTGGGCTACAGCAGCAGTAGTTCCCGAAC 133860 ||||||| |||||| || | ||| |||||||| || || | || || || |||| Sbjct 7984 ACTCGATCATGATCCAGCGGCGACCCATTTTGTGGGCGACGGCGCCGGTGGTGCCGGAAC 8043 Query 133861 CGCCGAATGAATC 133873 | |||| || || Sbjct 8044 CCGCGAAGGAGTC 8056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441252554893920