Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq6557 122 9e-23 >seq6557 Length=877522 Score = 122 bits (134), Expect = 9e-23 Identities = 208/294 (71%), Gaps = 6/294 (2%) Strand=Plus/Plus Query 161956 CTGTGGGAGACCTTCGGCGGCACCACCAACGCCGAGGGCTACCGCGAGCTGGACCCGCAC 162015 |||||||| ||||||||||| || | |||| | ||||||||| |||||| | Sbjct 682176 CTGTGGGACGTTTTCGGCGGCACGTTCACAGAGAAGGGTTTCCGCGAGCTTAACCCGCGC 682235 Query 162016 ATCGGTGCCATCTACGGCGACAGCATCACGCTCGATCGCGCACAGGCGATCCTGGCCAAC 162075 |||| |||||||||||| || ||||| || || || ||||| ||| || Sbjct 682236 GTCGGCCTGATCTACGGCGACTCGATTACGCTATTACGAGCGCAAGCGATTCTGTCCCGG 682295 Query 162076 CTG-CAGCGTCAGGGCTTCGCTGCCAGTAACGTCGTGTTCGGCGTGGGCAGCTACACGTA 162134 ||| | || |||| || || ||| ||||||||| | || | || ||| || || Sbjct 682296 CTGGCTGCCA-AGGGTTTTGCGAGCAGCAACGTCGTGCTGGGTATCGGTTCCTATACCTA 682354 Query 162135 CCAGTACAACACCCGCGACACGTTCGGTTCAGCAATGAAGGCGACG-TGGGCGCAGGTCA 162193 ||||||| ||||| |||| ||||| | || |||||||||||| | |||| ||||| Sbjct 682355 CCAGTACCTTACCCGGGACAGCTTCGGCTGGGCGATGAAGGCGACGTTCGGCG-TGGTCA 682413 Query 162194 ACGGCAAGG-GCGTGAACCTGTTCAAGGACCCGATCACCGACGACGGGACCAAG 162246 ||||| ||| ||| | | || |||||||| ||| | || |||| || |||||| Sbjct 682414 ACGGCGAGGCGCGCG-AGCTCTTCAAGGATCCGGTAACGGACGCAGGCACCAAG 682466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526538920710720