Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq4979 116 1e-21 >seq4979 Length=1283317 Score = 116 bits (128), Expect = 1e-21 Identities = 225/330 (68%), Gaps = 4/330 (1%) Strand=Plus/Plus Query 9110 CATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCG 9169 |||||||||||| || |||| || |||| |||||||| ||| || |||||| | | Sbjct 318236 CATGGCATCCGTTAATAAAGCAATTATCGTTGGCAATCTGGGCAAGGATCCGGAAGTCAG 318295 Query 9170 CTACCTCCCGAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACAA 9229 || | || ||||| || || | ||| || | | ||||| | ||| || || Sbjct 318296 ATATACGGCCAGTGGCGAGGCGATTTGCAACATTACTGTGGCGACCAGCGAAAACTGGAA 318355 Query 9230 GGACAAGGCGAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTTCGG 9289 ||||||| ||| ||| ||| || ||| |||||||||||| ||| | |||| ||||| Sbjct 318356 GGACAAGACGACCGGAGAGAAGAAAGAACAGACCGAGTGGCATCGCATTTCTTTTTTCGG 318415 Query 9290 CCGCCTCGCCGAGATCGTCGACGAGCACCTTCGCAAGGG--CGCATCGGTCTACATCGAG 9347 || || || | | | | || | ||| ||||| |||| | |||| ||||| Sbjct 318416 AAAGCTGGCTGAAGTTGCAGGCCAGTATCTTAAAAAGGGATCGCA--GATCTATGTCGAG 318473 Query 9348 GGGCGCATCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAG 9407 || | ||| || ||||||||| || | |||||||| || |||||||||||| Sbjct 318474 GGCAGTATCCGTACCCGGAAGTGGACCGACAAGGAAGGCCAGGAGCGTTACACGACCGAG 318533 Query 9408 ATCGTCGCCGACAGGATGCAGATGCTCGGA 9437 || || |||| |||| | ||||||||| Sbjct 318534 ATTCGCGGCGACGAGATGAAAATGCTCGGA 318563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200541112726896