Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1813 138 1e-27 seq3957 89.7 5e-13 >seq1813 Length=735787 Score = 138 bits (152), Expect = 1e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||||| |||||| |||||||| ||||| ||||||||||||||||| || || Sbjct 439184 GTAGGTGTTGATGAGCAGACTGTACATTTCTGAGTGGACGTTCTCCATGGCGATCTGGAA 439125 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 ||| || ||||| || || || ||||||||| || || ||| | ||| ||||| || Sbjct 439124 GCCATAGAAGCAGCGAGCTTCCGGCACCTGCACCTCCTGGCTGAACCTCTCCACCAGGTT 439065 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 || |||||||||||||| || ||||| || |||| |||||| ||||||||| Sbjct 439064 CTCATTGACGATGCCGTCAGACGCAGCGAAGAACGCCAACACGTGGGAGATGAAATGTTT 439005 Query 133347 CTCGTTGTCGTTCAAGCGCTCCCAGT 133372 ||| | | |||||| |||||||| Sbjct 439004 CTCCTCTTGCTTCAAGGTCTCCCAGT 438979 >seq3957 Length=668572 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/194 (71%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||||||||||| | || || || ||||| ||| | || || ||| | Sbjct 478684 AAAATGCAGATCTTCGTAAAAACATTAACAGGGAAGACCATAACCTTAGAGGTTGAGCCT 478743 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | || | || |||| ||||||||||| ||||| | || Sbjct 478744 TCAGACACAATCGATAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATTCCACCTGAT 478803 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| ||||||||||| || || | ||||| | |||||| Sbjct 478804 CAGCAGCGACTGATCTTCGCTGGCAAACAGCTTGAGGATGGTCGCACATTGTCAGACTAC 478863 Query 38421 AACATCCA-AAAGG 38433 ||||| || ||||| Sbjct 478864 AACATTCAGAAAGG 478877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500116305482240