Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq8012 102 3e-16 seq1112 87.8 7e-12 seq224 86.0 2e-11 >seq8012 Length=288746 Score = 102 bits (112), Expect = 3e-16 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276 ||||||| || | || ||||| | || || |||||| || ||||| || || || Sbjct 11278 TATAAAGACGAGTCGAAGACTTTCTCGCCAGAGGAAATTAGCTCGATGGTGCTGACAAAG 11219 Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336 ||||| || || || ||| ||| | ||| |||| || | || ||||| || || Sbjct 11218 ATGAAGGAGACTGCTGAAGCGTATCTCGGTAAGACAGTGACGAACGCTGTAATCACGGTG 11159 Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396 |||||||| || || || | ||||| ||||| || |||||||||||| || | | Sbjct 11158 CCCGCTTACTTTAACGACTCGCAACGTCAAGCCACCAAAGATGCAGGAGTGATCTCCGCC 11099 Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 | || ||||| || ||||| || ||||| || || |||||| | || || || || Sbjct 11098 CTTAACGTTCTCCGCATTATCAACGAACCCACCGCCGCTGCTATCGCTTACGGCCT 11043 >seq1112 Length=3255245 Score = 87.8 bits (96), Expect = 7e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 391134 AAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAA 391193 ||||| || || ||||||||||| || || || || || || || || ||| |||| || Sbjct 2623084 AAAATCCAGGACAAGGAAGGAATCCCCCCAGACCAGCAGCGCTTGATCTTCGCAGGCAAG 2623025 Query 391194 CAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCAC 391253 || ||||| ||||| | || | | || || |||||| | ||||| | || |||||| Sbjct 2623024 CAGCTTGAGGATGGCCGCACACTCTCAGACTACAATATTCAGAAGGAATCCACCCTTCAC 2622965 Query 391254 TTAGTATTAAGACTGAGAGGA 391274 || || | |||||||||||| Sbjct 2622964 TTGGTTCTCAGACTGAGAGGA 2622944 Score = 86.0 bits (94), Expect = 2e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 391134 AAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAA 391193 ||||| || || ||||||||||| || || || || || || || || ||| |||| || Sbjct 2620827 AAAATCCAGGACAAGGAAGGAATCCCCCCAGACCAGCAGCGCTTGATCTTCGCAGGCAAG 2620768 Query 391194 CAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCAC 391253 || ||||| ||||| | || | | || || |||||| | ||||| | || |||||| Sbjct 2620767 CAGCTTGAGGATGGCCGCACCCTTTCCGACTACAATATTCAGAAGGAATCTACCCTTCAC 2620708 Query 391254 TTAGTATTAAGACTGAGAGG 391273 || || | ||||||||||| Sbjct 2620707 TTGGTTCTCAGACTGAGAGG 2620688 >seq224 Length=2126973 Score = 86.0 bits (94), Expect = 2e-11 Identities = 119/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 63898 CCTTGATCATCAAACCCATGAGTGATTTCATGAGCTATAACTACTCCAATTCCTCCATAA 63957 |||||||||||||| |||| || | |||||| | || || || || ||||| ||| || Sbjct 2019962 CCTTGATCATCAAATGCATGCGTCAATTCATGTCCCATTACAACACCCATTCCACCAAAA 2019903 Query 63958 TTTTGTGCAATCGTATAATCTAAACTaaaaaaaGGTGGTTGTAAAATAGCAGCTGGAAAT 64017 || | | | || | || | | ||||||| | |||||| || ||||||||||| Sbjct 2019902 TTCAACGAATGTGGATTACGTATATCATAAAAAGGAGCTTGTAATATTCCAGCTGGAAAT 2019843 Query 64018 ACAATTTCATTTAATAAAGGATGATAATAAGCATTTAC--TTGGTG 64061 ||||||| |||| ||| ||| ||||||||||| |||||| Sbjct 2019842 ACAATTTGATTTTTGGTTGGAGTATAGTAAGCATTTACTGTTGGTG 2019797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975489663671888