Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1514 122 1e-22 seq1813 107 2e-18 seq402 84.2 3e-11 seq2291 82.4 9e-11 >seq1514 Length=8380 Score = 122 bits (134), Expect = 1e-22 Identities = 537/840 (64%), Gaps = 19/840 (2%) Strand=Plus/Minus Query 110329 GTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGA 110388 || ||||||| ||||| ||||| | ||| || || || ||| || | ||| || || Sbjct 4051 GTATATTCCATTATTTCAGTACAAAGGTTTGAGCTTTTTATGGTGCCAAGGTTTTTTTGG 3992 Query 110389 TTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 || ||| |||||| |||||| ||| | |||||||| || || ||||||||| | || Sbjct 3991 TTACTTTTCGAGTTGGCTGCATCTTTAAATAGCATGTAGGGTGTGCCAGTTTCCATTTGG 3932 Query 110449 GACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCC 110508 | | || | ||||| || ||| || ||| ||| || |||| Sbjct 3931 CTTTCCAATATTTCAAACCATAAGTCTTGGGCTTTTACCGTT---TTA-CGTACTTTTCC 3876 Query 110509 TCCTCGTACTTG----GTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACC 110564 | ||| | | | ||||| | || |||||| ||| || || ||| | | | | Sbjct 3875 TTCTCTTTCGTAACGTGTGTAAAGCTCTTCAAATGCCTCGCCATAGCAATCGGCCA-AGC 3817 Query 110565 CTTCGCCTT-GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGA 110623 || || || || ||| || | || |||||| | || || |||| |||||| | Sbjct 3816 CTGGGCATTCGTTGGGGCACATTAGCGACCAAACGTCGTTATCTTCCACCCGCTTCATAA 3757 Query 110624 ACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTT 110683 | | ||||| |||||||| || | ||||| ||||| ||| ||||| | ||| | Sbjct 3756 ATAAATCAGGTATCCACATGGCGTAAAAAAGATCACGAGCACGCATTTCTTCTTTACCGT 3697 Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743 |||| | | ||||| || | | ||| | ||||| || || | ||| | | Sbjct 3696 GGTTTTTCTTCAATTGCAAAAGCTCAAAAACATCGGCATGCCAAGGCTCCAAATATATGG 3637 Query 110744 CGATGGATCCCTTACGA---CGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGA 110800 | | || ||||| || | ||| |||| | |||||||| || || ||||||| | Sbjct 3636 CAAATGAGCCCTTGCGCTTGCCACCTCCCTGATCTACATAGCGAGCGGTATCATTGAATA 3577 Query 110801 CCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTAT 110860 ||| | ||| || || || || | || ||||||||||| | || || | Sbjct 3576 CCCGCAACATTGGTATTATGCCGTTTGAAGTGCCATTTGTACCTTTTATATACGAACCAG 3517 Query 110861 TGGCACGAATGTCGTGGATATGCATA--CCAATACCACCCGCCCACT-TACTAATTTGTG 110917 |||| | | | || ||||| || ||||||||||||||| | | | || |||| | Sbjct 3516 TGGCCCTTACATTATG--TATGCTTAGGCCAATACCACCCGCCGATTGTGATATTTTG-G 3460 Query 110918 CACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977 |||| | | | |||| | ||||||||||| || || || | || ||| | || || Sbjct 3459 CACATTGCTTTAATGTATCGTAAATACCATCTATTGAGTCGTCTTTCATGGTTAATAAAA 3400 Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037 |||| || || | ||| || || || || |||||||| | ||| || || ||||| Sbjct 3399 AGCATGACGATAGCTGTGGCTTTGGTGTACCTGCATTGAATAATGTGGGAGTGGCATGGG 3340 Query 111038 TGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGT 111097 | ||| | | || | || || || || | || ||| | |||| |||| | Sbjct 3339 TAAACCATCGCTCTGAAAGTAAATTATAGGTTTCAATGGCCGAGTCGATATCTATACCAT 3280 Query 111098 GAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAA 111157 ||||||| | || || ||||||| ||||| || || ||| || |||||||||| Sbjct 3279 GAATACCTACAGCTACACGCATGAGCATATGCTGTGGGCGTTCTGCTATATTTCCATCAA 3220 >seq1813 Length=735787 Score = 107 bits (118), Expect = 2e-18 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 119517 TCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTT 119576 ||||||| ||| ||||||||||||||||| || |||||||| ||||| | |||||| Sbjct 440301 TCATCCCTAGAAATGAGCTCATTACTGAATGTCAGACCAGGCATCAGTCCACGCTTCTTT 440242 Query 119577 AGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCAC 119623 ||||| || |||||| ||| ||||| || |||||||||||||| || Sbjct 440241 AGCCAGAAAATGGCAGCAAAGCTTCCTGAGAAGAAGATGCCCTCGAC 440195 >seq402 Length=946383 Score = 84.2 bits (92), Expect = 3e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||| ||||| ||||||| |||||| |||||||| |||| Sbjct 148623 TAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGTGGGTTCGATCCCCCCA 148682 Query 136777 GGGAACAGCTTTTAGATATATTTTTTGTATGTAT 136810 || |||||||| | || ||||| || |||| Sbjct 148683 TGGGCCAGCTTTTTTAAATCCTTTTTCTACGTAT 148716 >seq2291 Length=296724 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/94 (80%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||| ||||| ||||||| |||||| |||||||| |||| Sbjct 128520 TAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGTGGGTTCGATCCCCCCA 128461 Query 136777 GGGAACAGCTTTTAGATAT---ATTTTTTGTATG 136807 || |||||||| |||| |||||| | ||| Sbjct 128460 TGGGCCAGCTTTTTAATATGCGATTTTTAGCATG 128427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588909475160800