Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq367 136 9e-28 >seq367 Length=21361 Score = 136 bits (150), Expect = 9e-28 Identities = 418/639 (65%), Gaps = 13/639 (2%) Strand=Plus/Plus Query 9129 CGCTTTCTGGCCGAGATGGAGAAGGTCGTCCCTTGGTCGCGGCTGCTGTCGGTGATCGGG 9188 |||||| || |||| || || ||| |||||| | |||||| || |||| Sbjct 12464 CGCTTTTTGTCCGAAATCGAAGGGGTAACGCCTTGGCCCTCTCTGCTGAATGTCATCGCC 12523 Query 9189 CCGTATTACCCG--AAG-GGCGAGCGTGGCCGGCCGCCGATTGGCCTGGAACGGATGCTG 9245 | | | || ||| ||| || | || |||| || |||||||| || ||||| || ||| Sbjct 12524 CGGCACTATCCGGTAAGCGGTAAACGAGGCCATCCACCGATTGGTCTTGAACGAATACTG 12583 Query 9246 CGGATCTACTTGCTGCAGCAGTGGTACGGGTTGTCGGACGAAGGGCTTGAAGATGCGCTC 9305 || || ||| | ||||||| || | || || ||||| ||||| || ||||| | Sbjct 12584 CGTATGTACATTGTGCAGCAATGCTTTGGTTTTTCGGATGAAGGCACCGAGGATGCTGTA 12643 Query 9306 TACGACAGCATCGCGATGCGCGCCTTCGCGGGCATCGACCTGGCGCGCGAGAACGTGCCG 9365 ||||||||| || || ||| ||| | ||||| |||||| || || | ||| Sbjct 12644 TACGACAGCCAAGCCATTCGCCGCTTTGTTGGCATTGACCTGAATCGAGAAGCGGCACCG 12703 Query 9366 GACGCCACCACGCTGTTGAAATTCCGGCGCCTGCTGGTCGAGCACGCACTGACGCGAAAG 9425 || || || || ||| |||||||||| | |||||| | ||| ||||| | Sbjct 12704 GATGCGACGACCCTGCTGAAATTCCGCCATTTGCTGGAAGCGCATCATCTGACTGAATCC 12763 Query 9426 CTGTTCG--ACGAG--ATCGGCATCGAGTTGTGCGAGCGCGGGCTGATGATGAAGGAAGG 9481 || |||| || | || ||| | | || | |||||||| | | ||||| Sbjct 12764 CTCTTCGCTACAATCAATGCGCACCTGGCTG----AACGCGGGCTATTTCTTCGCGAAGG 12819 Query 9482 CACGCTGGTGGATGCGACGATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGAG 9541 ||| | || ||||| ||| | | | || | || || || |||||| || | ||| Sbjct 12820 TACGATTGTTGATGCCACGCTGATTGCAGCGCCTCCTTCGACCAAGAACAA-GGAACGAG 12878 Query 9542 C-CGTGACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGG 9600 | || || | || |||||||| || | ||| ||||| | ||| | ||||||||||||| Sbjct 12879 CGCGCGATACCGAAATGCATCAAACCAGGAAAGGCAAGCAGTGGCACTTCGGCATGAAGG 12938 Query 9601 CCCATGTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCA 9660 || |||| || || || | || || || || || | | || || || || || | Sbjct 12939 TGCACATCGGTGTTGATGCGCAATCCGGGCTTGTCCACACCCTGATCGGAACAGCAGCGA 12998 Query 9661 ACGAGCCGGACGTATCGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTG 9720 | | | || || | ||||| || || |||||||| ||| |||| || | ||||| Sbjct 12999 ATGTTCACGATGTTACTCAGGCACAAGCACTGCTGCATGGTGATGAAACCGATGTGTTTG 13058 Query 9721 GCGATGCGGGCTACACCGGCGTGGACAAGCGCGAGGAGA 9759 | |||||||| || || || || || || ||||||| Sbjct 13059 GTGATGCGGGTTATCAAGGTGTTGAAAAACGGGAGGAGA 13097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119020827397136