Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq4979 277 5e-70 >seq4979 Length=1283317 Score = 277 bits (306), Expect = 5e-70 Identities = 630/938 (67%), Gaps = 20/938 (2%) Strand=Plus/Plus Query 35279 GCGTATCACTAACGGGGATTCGGTACGTATCCGGAAAGCCCATAAGCCGCGCACATTCGC 35338 ||||||| ||| | || | | ||| ||||||||| ||||| ||||| |||||||| | Sbjct 645982 GCGTATCCGAAACCGAAATCCTGAACGAATCCGGAAACCCCATCAGCCGTGCACATTCAC 646041 Query 35339 GAGGCGTCAGGCGCCGCGGACGCTTACCTTTTCCTTGGTAGACGAGAATTTCCGAGCCGT 35398 ||||||||||||| |||||| | || | || || || || |||||||||||||||| Sbjct 646042 GAGGCGTCAGGCGGCGCGGATTGATGCCCTCGCCCTGATACACAAGAATTTCCGAGCCGT 646101 Query 35399 CCTTGTGGTATCGAGCCGACAGCGTACGCGTTACGCTGTCCGGATAGGCCATGCCAAATC 35458 |||||| ||| || || || || || || | ||||| || || ||| ||| ||||| | Sbjct 646102 CCTTGTAGTAGCGGGCGGAGAGGGTTCGGGCGACGCTATCGGGGTAGACCAGTCCAAAGC 646161 Query 35459 CAAAGCCGTTACCCGCCGCGCGATGCTTCTCGGCATATGCTTGTAGGTACGTCCAGAGGT 35518 | |||||||| || || || || || | ||||| |||| ||||| | |||||| | Sbjct 646162 CGAAGCCGTTGCCGGCGGCTTTGTGTTTGGCAGCATAGCCTTGCAGGTAGGCCCAGAGCT 646221 Query 35519 TCGGCG-TCAGGGTGTACTTGGATTGGACCTTGCGCTTTTCGTGATCAAAAAATCTCTCA 35577 | | || |||||||||| ||| | || | | ||| |||| | |||| | || Sbjct 646222 T-GTCGCTCAGGGTGTATTTGCTGTCCACTTGCCCCTTGGCGTGGTTGTAAAAACGTTCG 646280 Query 35578 CCGTCCCACGGAAGAACTGGCTCGCTGCCGTCAGTCTTGTGCA--AAATCGAAG-CGAGA 35634 |||||||| | | ||||||| |||||| || ||||||| | ||| | | Sbjct 646281 CCGTCCCATGCCAATTTCGGCTCGCGGCCGTCCGTTTTGTGCAGGATGTCGCCGATGGTT 646340 Query 35635 CGAGGCCCATCTGCCGGCAAGCGCAGATCGTCCCATGAGAAG-----CCGGTC-TTCTTC 35688 || | || | || |||| |||| ||| ||| |||| |||||| ||| Sbjct 646341 CGCCGTCCCTTGGCGGGCAGCGGCAGCGCGTTCCAGTCGAAGCTGATCCGGTCGGCCTTG 646400 Query 35689 CGGAATCCGACGATGACGATTCGCTCACGATGCTGAGGGGTGAAGTGCTGGCCGTCGATG 35748 | || |||||||| | ||| || ||||| || || || |||||| |||||||| Sbjct 646401 CAAAAGCCGACGATCAGGATGCGTTCACGGTGTTGCGGTACGAAGTGGGCACCGTCGATA 646460 Query 35749 ATCTTGTAATGGACGTCATACTGGAGCTCGTCACGCAACGTTTGCAAGATAACGGCAAAA 35808 | | |||| ||| || || ||||| | | || ||| | | | || Sbjct 646461 ACGCGGGTGTGGATGTCGTAGCCCAGATCGTC---GAGTGCCCGCTTGATGATGTCGAAG 646517 Query 35809 GTGTTGCCTTTATCGTGCGACAACAAATTCTTCACGTTTTCCAACACGAAGGCCGCAGGT 35868 ||| |||||| ||||| || | || ||| || |||||||| | || ||||||| || Sbjct 646518 GTGCGGCCTTTGTCGTGTGATATCAGATTTTTGACGTTTTCGAGCAGGAAGGCCCGTGGC 646577 Query 35869 CGCTTCGCTGCGATGATCCGGGCTACGTCGAAAAATAGAGTGCCCTGAGTAGTGCACTCG 35928 |||| | | ||||||| ||| || ||||| || || ||||| || || | | Sbjct 646578 TGCTTGGTTTCGATGATGCGGCAGACATCGAAGAACAGGGTGCCTTGTGTTTCGTCGGCA 646637 Query 35929 AAGCCGTGCGGGCGGCCCAGTGAGTTCTTTTTGCTTACTCCCGCGATACTAAACGGCTGG 35988 |||||||| | |||||| || | ||||||||| || || || || ||||||||| Sbjct 646638 AAGCCGTGGGCGCGGCCAAGGGCGTTCTTTTTCGAGACCCCGGCAATCGAGAACGGCTGG 646697 Query 35989 CAAGGGAAGCCGGCAAGCAAGACGTCATGAGTTGGCACACTTTCGGCCG---CGAATGGG 36045 || |||||||||||||||| | ||| || || | | | ||||| | ||| | | Sbjct 646698 CAGGGGAAGCCGGCAAGCAGCAGGTCGTG-GTCAG--GAATGTCGGCGGCGTCGACTTTG 646754 Query 36046 ACGATGTCACCGATGAAAGGATGATGGTCGCCGAAGTTATCGACGTACGTCTTCTTCGAA 36105 ||| || ||| ||| || || || |||||| ||| | || ||||| | || Sbjct 646755 GTGATATCGCCGTTGATGGGGTGGCCACCGGGGAAGTTTTCGGCATAGGTCTTTTGCGCG 646814 Query 36106 AAGTCGTTCCACTCGCTAGTGAATACGCATTCACCGCCATGAGCCTCAAAACCAAGGCGA 36165 | | || ||| ||||| ||||| ||||||| || || | ||||||| | | || Sbjct 646815 TAATTGTCCCATTCGCTGGTGAACACGCATTGGCCACCGAGTTCCTCAAAGGCCATCCGG 646874 Query 36166 ATGCCACCGATTCCGGCGAACAGATCGATGAAACGGAA 36203 ||||| || | || || ||||| || || || | ||| Sbjct 646875 ATGCCGCCAACGCCTGCAAACAGGTCAATAAAGCTGAA 646912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129640487758744