Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_015281.1 Length=179563 Score E Sequences producing significant alignments: (Bits) Value seq6036 749 0.0 >seq6036 Length=8020 Score = 749 bits (830), Expect = 0.0 Identities = 752/973 (77%), Gaps = 4/973 (0%) Strand=Plus/Plus Query 167884 ACTAACAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCA 167943 ||| | ||||| | || |||||||||| || | ||| | || || | || || Sbjct 63 ACTGAAAACCGTTTATACATCGGTTGGTTTGGTTGTTTAATGTTCCCTACATTATTAACA 122 Query 167944 GCAACTATCTGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATC 168003 |||||| |||| |||| |||| ||| |||| ||||| || || || ||||| || ||| Sbjct 123 GCAACTTCTTGTTACATCATCGCATTCATCGCAGCTCCTCCAGTTGATATCGATGGTATC 182 Query 168004 CGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTC 168063 ||||| || || || |||||| | | || ||||||||||||||||||||||||||| || Sbjct 183 CGTGAGCCAGTAGCAGGTTCATTATTATACGGTAACAACATCATCTCTGGTGCAGTTATC 242 Query 168064 CCTTCTTCTAATGCTATTGGACTTCACTTCTATCCCATCTGGGAAGCAGCATCACTCGAT 168123 ||| |||||| ||||| || | |||||||| || || ||||||||||| ||| ||||| Sbjct 243 CCTAGTTCTAACGCTATCGGTATGCACTTCTACCCAATTTGGGAAGCAGCTTCAATCGAT 302 Query 168124 GAGTGGTTGTATAACGGTGGTCCTTTCCAACTAGTAGTCTTTCACTTCCTCATCGG--TA 168181 |||||||| || ||||||||||||| |||| || | || | ||||||| | | || || Sbjct 303 GAGTGGTTATACAACGGTGGTCCTTACCAATTAATCGTTTGTCACTTCTTATTAGGAGTA 362 Query 168182 TCTATGCATACATGGGACGTGAATGGGAACTTTCATATCGTTTAGGTATGCGTCCATGGA 168241 | || | |||||||| |||||||||||| | || || ||||||||||||||||| |||| Sbjct 363 GC-AT-CTTACATGGGTCGTGAATGGGAATTATCTTACCGTTTAGGTATGCGTCCTTGGA 420 Query 168242 TCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTGTATCCTT 168301 ||| || || | |||||| ||||| || ||||| |||||||||| |||| || || Sbjct 421 TCTTCGTAGCTTTCTCTGCTCCAGTAGCAGCAGCTTCTGCAGTATTCTTAGTATACCCAA 480 Query 168302 TCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACA 168361 | ||||||||| |||||||||| ||||| | || || || || || ||||||| || Sbjct 481 TTGGTCAAGGTTCATTCTCTGATGGTATGCCTTTAGGTATTTCTGGTACTTTCAACTTCA 540 Query 168362 TGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTG 168421 |||| || ||||||||||||||||| ||| | ||||| || ||||| ||| || |||| Sbjct 541 TGTTAGTATTCCAAGCTGAGCACAACATTTTAATGCACCCATTCCACATGGCTGGTGTTG 600 Query 168422 CTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTC 168481 |||| ||||||||||| ||| || ||||||||||| || || ||||||||| Sbjct 601 CTGGTGTATTTGGTGGTTCTTTATTCTCAGCTATGCACGGTTCATTAGTAACTTCTTCTT 660 Query 168482 TCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAG 168541 | || | || || ||||||| |||||| |||||||||||||| ||||| ||||||| Sbjct 661 TAATTCGTGAAACAACTGAAAGCGAATCAACTAACTACGGTTACAAATTCGGTCAAGAAG 720 Query 168542 AAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACG 168601 ||||||| ||||||||||| || ||||| ||||||||||||||||| ||||||||||||| Sbjct 721 AAGAAACTTACAACATCGTTGCAGCTCACGGTTACTTCGGTCGTTTAATCTTCCAATACG 780 Query 168602 CTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCA 168661 |||||||||||||||| || | || ||||||||| | ||| |||||| ||| | || | Sbjct 781 CTTCATTCAACAACTCTCGTGCTTTACACTTCTTCTTAGCTTTATGGCCAGTTTTAGGTA 840 Query 168662 TCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCA 168721 ||||||| || || | || | || ||||| |||||| | |||||||||||||||| Sbjct 841 TCTGGTTAACTGCTATGGGTATTAGTACTATGGCGTTCAACTTAAACGGTTTCAACTTCA 900 Query 168722 ACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTGAACC 168781 |||| || | | ||| || |||||||| | ||||| ||||| ||| | | |||| Sbjct 901 ACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACACTTGGGCTGATATCGTTAACC 960 Query 168782 GCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGATC 168841 | |||| | | ||||||||||| ||||| || |||||||| |||||||||||| | ||| Sbjct 961 GTGCTGATTTAGGTATGGAAGTAATGCACGAACGTAACGCGCACAACTTCCCATTAGATT 1020 Query 168842 TTGCTGCTGCTGA 168854 | ||| | | ||| Sbjct 1021 TAGCTTCAGGTGA 1033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574408713206880