Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq6036 755 0.0 >seq6036 Length=8020 Score = 755 bits (836), Expect = 0.0 Identities = 780/1015 (77%), Gaps = 6/1015 (1%) Strand=Plus/Plus Query 163765 GCGTGTCCTCCTGGGAATCATTCTGCGAATGGGTGACTTCCACAAACAACCGCCTCTATG 163824 |||| || | |||||| ||||| | ||| | ||| || | ||||| | || Sbjct 22 GCGTTTCATTATGGGAACGTTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACA 81 Query 163825 TTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACCATCTGTTTCATCG 163884 | |||||||| || | | ||| ||||||| | | ||||||| |||| |||| Sbjct 82 TCGGTTGGTTTGGTTGTTTAATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCA 141 Query 163885 TCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGAACCTGTTGCAGGTT 163944 |||| ||| |||| ||||| || || || ||||||||||| ||||| || || ||||||| Sbjct 142 TCGCATTCATCGCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTT 201 Query 163945 CGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCGTCC-AATGCAATT 164003 | | | || ||||||||||||||||||||||||||| | |||| || | || || || Sbjct 202 CATTATTATACGGTAACAACATCATCTCTGGTGCAGTTAT-CCCTAGTTCTAACGCTATC 260 Query 164004 GGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATGGCTTTACAACGGT 164063 ||| | ||||||||||| ||||||||||| || || | ||||| ||| | ||||||||| Sbjct 261 GGTATGCACTTCTACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGT 320 Query 164064 GGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGG--TATCTATGCATACATGGGTC 164121 ||||||| |||| | |||| | |||||| | | || || | || | |||||||||| Sbjct 321 GGTCCTTACCAATTAATCGTTTGTCACTTCTTATTAGGAGTAGC-AT-CTTACATGGGTC 378 Query 164122 GTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGTGTTGCTTACTCTG 164181 |||| |||||| | ||||||||| | ||||||||||||||||| | || |||| ||||| Sbjct 379 GTGAATGGGAATTATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTG 438 Query 164182 CACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCGTTCT 164241 | || || |||||||| || ||||| ||| | || || || | ||||||||||| |||| Sbjct 439 CTCCAGTAGCAGCAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCT 498 Query 164242 CTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTGGTGTTCCAAGCAG 164301 |||| | ||||| | || || ||||| || ||||||| |||||| || |||||||| | Sbjct 499 CTGATGGTATGCCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTG 558 Query 164302 AGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTATTTGGCGGTT 164361 |||||||||| | |||||||| ||||| ||| || |||||||| |||||||| |||| Sbjct 559 AGCACAACATTTTAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTT 618 Query 164362 CTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAAACCACCG 164421 || | ||| || ||||||||||| | || |||||||| | |||||||||| || | Sbjct 619 CTTTATTCTCAGCTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTG 678 Query 164422 AAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTG 164481 ||| || || ||||| |||||||| || ||||||||||||||||| |||||||| | Sbjct 679 AAAGCGAATCAACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCG 738 Query 164482 TTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATTCAACAACTCCC 164541 |||| |||||||||||||| |||||| | ||||||||||||||||||||||||||||| | Sbjct 739 TTGCAGCTCACGGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTC 798 Query 164542 GTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGGTTCACCGCACTTG 164601 || | || ||||||||| | ||| |||||| ||| | || |||||||| || || | | Sbjct 799 GTGCTTTACACTTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGG 858 Query 164602 GTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATG 164661 || || || ||||| |||||| | |||||||||||||||||||| || | | ||| Sbjct 859 GTATTAGTACTATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATT 918 Query 164662 GTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCTGGTCTGGGTATGG 164721 || |||||||| ||||||||||||| || | | ||||| |||| | | ||||||| Sbjct 919 CACAAGGTCGTGTAATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGG 978 Query 164722 AAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGCTGCTGCTGA 164776 |||| |||||||| |||||||| ||||||||||| | ||| | ||| | | ||| Sbjct 979 AAGTAATGCACGAACGTAACGCGCACAACTTCCCATTAGATTTAGCTTCAGGTGA 1033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556861895343840