Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq6036 765 0.0 >seq6036 Length=8020 Score = 765 bits (848), Expect = 0.0 Identities = 784/1021 (77%), Gaps = 2/1021 (0%) Strand=Plus/Plus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| | || || ||| | ||| | | || | |||||||| ||| ||| Sbjct 42 TTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTTGGTTGTTTA 101 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCA 168610 ||| |||| |||||||||||| | | |||| ||| | ||||| || || || || Sbjct 102 ATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCATTCATCGCAGCTCCT 161 Query 168611 CCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAAC 168670 || || |||||||| || ||| | || || ||||||||| | || | || || |||||| Sbjct 162 CCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTATTATACGGTAACAAC 221 Query 168671 ATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATT 168730 |||||||| ||||||||| | || ||| ||||| |||||| | ||||||||||||||| Sbjct 222 ATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATGCACTTCTACCCAATT 281 Query 168731 TGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATC 168790 |||||||||||| ||||||||||||||||||| || |||||||||||||| || | | Sbjct 282 TGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCTTACCAATTAATCGTT 341 Query 168791 TTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGA 168850 | |||||| || | ||| | | | ||||||||| | | ||||||||||| ||| | Sbjct 342 TGTCACTTCTTATTAGGAGTAGCATCTTACATGGGTCGTGAATGGGAATTATCTTACCGT 401 Query 168851 CTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCA 168910 |||||||| | |||||||||| || |||| || || |||||| | ||||| | |||| Sbjct 402 TTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCAGTAGCAGCAGCTTCTGCA 461 Query 168911 GTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATT 168970 |||||| | ||||||||| ||||||| ||||| |||||||||||||||||| |||| ||| Sbjct 462 GTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGATGGTATGCCTTTAGGTATT 521 Query 168971 TCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCC 169030 ||||| || |||||||||||||| ||||||||||| |||||||||||| | ||||| || Sbjct 522 TCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCACAACATTTTAATGCACCCA 581 Query 169031 TTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGT 169090 ||||| ||||| || || || ||| | || ||||| ||| ||||||| || ||||| ||| Sbjct 582 TTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTATTCTCAGCTATGCACGGT 641 Query 169091 TCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGT 169150 ||| | ||||| |||||| |||| | || || ||||| ||||| ||||| ||| Sbjct 642 TCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGCGAATCAACTAACTACGGT 701 Query 169151 TACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGT 169210 ||||| |||||||||||||||||||| || || || |||||||| || || ||||||||| Sbjct 702 TACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCACGGTTACTTCGGT 761 Query 169211 AGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 169270 | ||||||||||| || || ||||||||||| | | | ||||||||| |||| Sbjct 762 CGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCTTTACACTTCTTCTTAGCT 821 Query 169271 GTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 169330 | | |||||| || || | |||||||| |||||||||| |||| ||||| |||||| Sbjct 822 TTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATTAGTACTATGGCGTTCAAC 881 Query 169331 TTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACA 169390 || ||||| || ||||| |||||||||||||||||| | ||| | || || Sbjct 882 TTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACACT 941 Query 169391 TGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCT 169450 |||| ||| | ||||| | || | | ||||||||||||||||| || |||||||| Sbjct 942 TGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTAATGCACGAACGTAACGCG 1001 Query 169451 CACAACTTCCCACTAGACTTAGCATCTGCTGAGACTA-CAGAGGTTGCTTTAACTGCACC 169509 |||||||||||| |||| ||||| || | ||| | || | ||||||||||| || || Sbjct 1002 CACAACTTCCCATTAGATTTAGCTTCAGGTGA-AGTATTACCAGTTGCTTTAACAGCTCC 1060 Query 169510 A 169510 | Sbjct 1061 A 1061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564377846321280