Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq6036 713 0.0 >seq6036 Length=8020 Score = 713 bits (790), Expect = 0.0 Identities = 742/973 (76%), Gaps = 0/973 (0%) Strand=Plus/Plus Query 162384 TTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACT 162443 |||||| | ||| | ||| ||| | ||||| | || |||||||||| || | Sbjct 41 TTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTTGGTTGTTT 100 Query 162444 GATGATTCCAACTCTGTTGGCAGCAACCATCTGTTTCATCGTCGCCTTCGTCGCTGCTCC 162503 ||| | || || | || ||||||| |||| |||| |||| ||| |||| ||||| Sbjct 101 AATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCATTCATCGCAGCTCC 160 Query 162504 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 162563 || || || ||||| || |||||||| || || || |||||| | | || |||||||| Sbjct 161 TCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTATTATACGGTAACAA 220 Query 162564 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 162623 ||||||||||||||||||| | || ||| ||||| || ||| | |||||||| || || Sbjct 221 CATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATGCACTTCTACCCAAT 280 Query 162624 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 162683 |||||||| || ||| | ||||||||| | || ||||||||||||| |||| | | || Sbjct 281 TTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCTTACCAATTAATCGT 340 Query 162684 ATTCCACTTCCTGATCGGCATCTATGCCTACATGGGACGTGAATGGGAACTCTCTTACCG 162743 | |||||| | | || | | |||||||| |||||||||||| | |||||||| Sbjct 341 TTGTCACTTCTTATTAGGAGTAGCATCTTACATGGGTCGTGAATGGGAATTATCTTACCG 400 Query 162744 TCTTGGTATGCGTCCATGGATCTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCGGC 162803 | | ||||||||||| ||||||| |||||| | |||||| || || |||||||| || || Sbjct 401 TTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCAGTAGCAGCAGCTTCTGC 460 Query 162804 AGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTAT 162863 ||| ||| | || || || | ||||||||||| |||||||| | ||||| || ||||| Sbjct 461 AGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGATGGTATGCCTTTAGGTAT 520 Query 162864 CAGTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATCC 162923 |||||| ||||||| |||| | || |||||||| |||||||||||| | ||||| || Sbjct 521 TTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCACAACATTTTAATGCACCC 580 Query 162924 CTTCCACATGTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGG 162983 ||||||||| ||||| || ||||| || |||||||| | ||| || |||||||| Sbjct 581 ATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTATTCTCAGCTATGCACGG 640 Query 162984 TTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGG 163043 ||| || || || ||||| | | ||||| || ||||||| || ||| ||||| || Sbjct 641 TTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGCGAATCAACTAACTACGG 700 Query 163044 TTACAAGTTCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTCGG 163103 |||||| ||||||||||||||||| || ||||||||||| ||||| || ||||||||||| Sbjct 701 TTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCACGGTTACTTCGG 760 Query 163104 TCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGC 163163 |||||| ||||||||||| || |||||||||||||| ||| | || ||||||||| | || Sbjct 761 TCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCTTTACACTTCTTCTTAGC 820 Query 163164 TGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAA 163223 | |||||| ||| | || |||||||| || || | || | || ||||| ||||| Sbjct 821 TTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATTAGTACTATGGCGTTCAA 880 Query 163224 CCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACAC 163283 | | |||||||||||||||||||| || | | ||| || |||||||| | ||||| Sbjct 881 CTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACAC 940 Query 163284 CTGGGCAGACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGC 163343 ||||| || | | |||||||| | ||| ||||||||||| |||||||| || || || Sbjct 941 TTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTAATGCACGAACGTAACGC 1000 Query 163344 TCACAACTTCCCA 163356 |||||||||||| Sbjct 1001 GCACAACTTCCCA 1013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557521020887200