Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq6036 679 0.0 >seq6036 Length=8020 Score = 679 bits (752), Expect = 0.0 Identities = 740/990 (75%), Gaps = 20/990 (2%) Strand=Plus/Plus Query 167079 TGGGAATCCTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTC 167138 |||||| || || | |||| |||| || ||| | |||||| | || |||||||||| Sbjct 33 TGGGAACGTTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTT 92 Query 167139 GGCGTTCTGATGATCCCTACGTTGCTTGCAGCAACCATCTGTTTCATCATCGCCTTCGTC 167198 || | | ||| ||||||| || | ||||||| |||| ||||||||| ||| || Sbjct 93 GGTTGTTTAATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCATTCATC 152 Query 167199 GGTGCTCCTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTAT 167258 | |||||||| || || |||||||||||||| || ||||| || |||||| | | || Sbjct 153 GCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTATTATAC 212 Query 167259 GGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTC 167318 ||||||||||||||||||||||||||| | ||| |||||| ||||| ||| | |||||| Sbjct 213 GGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATGCACTTC 272 Query 167319 TATCCCATCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAA 167378 || || || ||||||||||| | |||| |||||||| ||||| |||||||||| |||| Sbjct 273 TACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCTTACCAA 332 Query 167379 CTCGTAGTTTTCCACTTCCT-----GATTGGCATCTATGCCTATATGGGTCGTGAGTGGG 167433 | | |||| |||||| | || | |||||| || ||||||||||| |||| Sbjct 333 TTAATCGTTTGTCACTTCTTATTAGGAGTAGCATCT-----TACATGGGTCGTGAATGGG 387 Query 167434 AACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCG 167493 || | ||||||||| | ||||||||||| ||||||| || || | |||||||||||| | Sbjct 388 AATTATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCAGTAG 447 Query 167494 CTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGA 167553 | ||||| ||||| |||||| | || || || | ||||||||||| |||||||| | | Sbjct 448 CAGCAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGATGGTA 507 Query 167554 TGCCTCTTGGTATCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACA 167613 ||||| | ||||| |||||||| ||||||| |||| | || |||||||| |||||||||| Sbjct 508 TGCCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCACAACA 567 Query 167614 TCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCA 167673 | | |||||||| ||||| ||| || |||||||| ||||| || |||||| | ||| Sbjct 568 TTTTAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTATTCT 627 Query 167674 GTGCAATGCACGGTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGT 167733 || ||||||||||| | || || ||||| | |||||||||| || |||| || | Sbjct 628 CAGCTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGCGAAT 687 Query 167734 CCCAGAACTATGGTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTC 167793 | ||||| |||||||| |||||||| |||||||| || || |||||||| || |||| Sbjct 688 CAACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTC 747 Query 167794 ATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGC 167853 | |||||||||||||| | |||||||||||||| || ||||||||||| || | | | Sbjct 748 ACGGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCTTTAC 807 Query 167854 ACTTCTTCTTGGCAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNN 167913 |||||||||| || |||||| ||| | |||||||||| Sbjct 808 ACTTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATTAGTA 867 Query 167914 NNNNNNNATTCAACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGAT-----AGTTC 167968 |||||| | |||||||||||||||||||| || | | ||| || || Sbjct 868 CTATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTC 927 Query 167969 TGGTAAGGTTCTGCCTACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGT 168028 |||| || | |||||||| || | | |||||||||| | | ||||||||||| Sbjct 928 GTGTAA---TCAAC--ACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGT 982 Query 168029 TATGCACGAGCGTAATGCTCACAACTTCCC 168058 |||||||| ||||| || ||||||||||| Sbjct 983 AATGCACGAACGTAACGCGCACAACTTCCC 1012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560544679326400