Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq6036 733 0.0 >seq6036 Length=8020 Score = 733 bits (812), Expect = 0.0 Identities = 774/1019 (76%), Gaps = 0/1019 (0%) Strand=Plus/Plus Query 215294 TTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTC 215353 || |||| ||| ||||| |||||| || ||| | ||| | |||||||||||| | Sbjct 42 TTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTTGGTTGTTTA 101 Query 215354 ATGATTCCTTGCCTCCTCGCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCT 215413 ||| | ||| | | |||| || |||||| |||| | ||||||||||| || ||| Sbjct 102 ATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCATTCATCGCAGCTCCT 161 Query 215414 CCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAAC 215473 || || |||||||| || ||| | |||||||| || ||||| ||| | || ||||||||| Sbjct 162 CCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTATTATACGGTAACAAC 221 Query 215474 ATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATC 215533 |||||||||||||| ||| | |||||||| ||||| ||||| | ||||||||||| || Sbjct 222 ATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATGCACTTCTACCCAATT 281 Query 215534 TGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATC 215593 ||||||||||| || | || || ||| | ||||| ||||| |||| |||| | | | Sbjct 282 TGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCTTACCAATTAATCGTT 341 Query 215594 TTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGA 215653 | |||||| | | || | | | ||| || | | |||||| | |||||| | Sbjct 342 TGTCACTTCTTATTAGGAGTAGCATCTTACATGGGTCGTGAATGGGAATTATCTTACCGT 401 Query 215654 TTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCA 215713 ||||||||| | |||||||||| || |||| ||| || || ||| | || || | |||| Sbjct 402 TTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCAGTAGCAGCAGCTTCTGCA 461 Query 215714 GTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATC 215773 |||||| | || || ||| | ||||| ||||| |||||||||| |||||| | || || Sbjct 462 GTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGATGGTATGCCTTTAGGTATT 521 Query 215774 TCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCA 215833 ||||| || ||||||| |||||| || ||||| ||||||||||||||| | ||||||||| Sbjct 522 TCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCACAACATTTTAATGCACCCA 581 Query 215834 TTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGT 215893 ||||||||| ||||| |||||||| || |||||||| || ||||| || ||||||||| Sbjct 582 TTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTATTCTCAGCTATGCACGGT 641 Query 215894 TCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGT 215953 ||| | || || |||||| |||| | || |||||||| ||||| ||||||||| Sbjct 642 TCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGCGAATCAACTAACTACGGT 701 Query 215954 TACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGT 216013 ||||| ||||| ||||| || ||||| ||||||||||| || || ||||||||||| ||| Sbjct 702 TACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCACGGTTACTTCGGT 761 Query 216014 CGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCA 216073 || | |||||||||||||| || ||||||||||| | | | ||||||||| | || Sbjct 762 CGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCTTTACACTTCTTCTTAGCT 821 Query 216074 GCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAAC 216133 || || ||| | |||||||| |||||| |||||| | ||||||||||||||| Sbjct 822 TTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATTAGTACTATGGCGTTCAAC 881 Query 216134 CTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACT 216193 | |||||||||||||||||||| || || ||||| || ||| || || ||| Sbjct 882 TTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACACT 941 Query 216194 TGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCT 216253 ||||| || | ||||| | || | | |||||||||||||||||||| |||||||| Sbjct 942 TGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTAATGCACGAACGTAACGCG 1001 Query 216254 CACAACTTCCCATTAGACTTGGCTGCTGCTGAATCAACACCAGTTGCTTTAACTGCACC 216312 ||||||||||||||||| || ||| | | |||| | ||||||||||||||| || || Sbjct 1002 CACAACTTCCCATTAGATTTAGCTTCAGGTGAAGTATTACCAGTTGCTTTAACAGCTCC 1060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744997443033280