Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq6036 673 0.0 >seq6036 Length=8020 Score = 673 bits (746), Expect = 0.0 Identities = 722/951 (76%), Gaps = 14/951 (1%) Strand=Plus/Plus Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGCCGCTACA 164850 |||||| | || |||||||||| ||| | | ||| |||| || | | || || Sbjct 69 AACCGTTTATACATCGGTTGGTTTGGTTGTTTAATGTTCCCTACATTATTAACAGCAACT 128 Query 164851 ATTTGTTTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGAA 164910 ||||| || | ||||||||||| ||||| || || || || |||||||| ||||| Sbjct 129 TCTTGTTACATCATCGCATTCATCGCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAG 188 Query 164911 CCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTCT 164970 || || |||||||| || | |||||||||||||||||||||||||| || | || | Sbjct 189 CCAGTAGCAGGTTCATTATTATACGGTAACAACATCATCTCTGGTGCAGTTATCCCTAGT 248 Query 164971 TCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAATGG 165030 |||||||| ||||| | |||||||| || ||||||||||| || | || ||||| ||| Sbjct 249 TCTAACGCTATCGGTATGCACTTCTACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGG 308 Query 165031 TTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGTAGCTTGC 165090 || |||||||||||||||||||| || | || | |||||| | | || ||||| | Sbjct 309 TTATACAACGGTGGTCCTTACCAATTAATCGTTTGTCACTTCTTATTAGGAGTAGCATCT 368 Query 165091 TACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGTA 165150 |||||||||||||| |||||| | |||||||| | ||||||||||||||||| | |||| Sbjct 369 TACATGGGTCGTGAATGGGAATTATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTA 428 Query 165151 GCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTTTCGGTCAA 165210 || | || || || || || ||| | ||||| ||| | || || || | |||||| Sbjct 429 GCTTTCTCTGCTCCAGTAGCAGCAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAA 488 Query 165211 GGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTC 165270 || |||||||||||||||||| | ||||| ||||||||||| |||| ||||| || Sbjct 489 GGTTCATTCTCTGATGGTATGCCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTA 548 Query 165271 TTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTA 165330 |||||||| || || |||||| | ||||| || ||||||||| || |||||||| ||| Sbjct 549 TTCCAAGCTGAGCACAACATTTTAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTA 608 Query 165331 TTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCACTCGTCCGC 165390 || ||||| ||| | ||||| |||||||| || | || ||||| || | | || Sbjct 609 TTTGGTGGTTCTTTATTCTCAGCTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGT 668 Query 165391 GAGACAACTGAAACAGAGAGTCA--GAACTACGGTTATAAGTTTGGACAAGAAGAAGAGA 165448 || ||||||||| || || ||| ||||||||||| || || || ||||||||||| | Sbjct 669 GAAACAACTGAA--AGCGAATCAACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAA 726 Query 165449 CCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACGCATCCT 165508 | || |||||||| || || ||||| |||||||||||| | || ||||||||||| || | Sbjct 727 CTTACAACATCGTTGCAGCTCACGGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCAT 786 Query 165509 TCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTATCTGGT 165568 ||||||| || ||| | | ||||||||| | || |||||| || | |||||||||| Sbjct 787 TCAACAACTCTCGTGCTTTACACTTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGT 846 Query 165569 TCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGT 165628 | |||||| | ||| |||| || ||||| |||||| | |||||||||||||||||||| | Sbjct 847 TAACTGCTATGGGTATTAGTACTATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAAT 906 Query 165629 CTATTGTTGATAGTCAGAACAAAATC-----ATCCCTACTTGGGCTGACGTTCTGAACCG 165683 | |||| ||| || |||| || ||| ||||||||||| | | ||||| Sbjct 907 CAGTTGTAGAT--TC---ACAAGGTCGTGTAATCAACACTTGGGCTGATATCGTTAACCG 961 Query 165684 TGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCCC 165734 ||||| | | ||||||||||| ||||| || |||||||| ||||||||||| Sbjct 962 TGCTGATTTAGGTATGGAAGTAATGCACGAACGTAACGCGCACAACTTCCC 1012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563597134512640