Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq6036 719 0.0 >seq6036 Length=8020 Score = 719 bits (796), Expect = 0.0 Identities = 772/1021 (76%), Gaps = 0/1021 (0%) Strand=Plus/Plus Query 169695 TGATTGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGAT 169754 || |||| | || || || | ||||| | || | |||||||| ||| || ||| | Sbjct 47 TGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTTGGTTGTTTAATGTT 106 Query 169755 CCCATGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGT 169814 ||| ||||| ||||| | | || | ||| | || |||||||||||||| || || Sbjct 107 CCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCATTCATCGCAGCTCCTCCAGT 166 Query 169815 GGACATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCAT 169874 || |||||||| ||| | || || |||||||||||||| | || |||||||||||||| Sbjct 167 TGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTATTATACGGTAACAACATCAT 226 Query 169875 CTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGA 169934 ||||||||||||| | || ||| ||||| |||||| | |||||||| || |||||||| Sbjct 227 CTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATGCACTTCTACCCAATTTGGGA 286 Query 169935 AGCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCA 169994 |||||| | | ||||||||||| || |||||||||||||| |||||| | | | || Sbjct 287 AGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCTTACCAATTAATCGTTTGTCA 346 Query 169995 CTTCCTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGG 170054 |||| | | ||| | | | ||||||||| | | |||||| |||| ||||||||||| Sbjct 347 CTTCTTATTAGGAGTAGCATCTTACATGGGTCGTGAATGGGAATTATCTTACCGTTTAGG 406 Query 170055 TATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATT 170114 ||||||||||||||||| ||||| | ||||||||||| ||||||| | || ||||| Sbjct 407 TATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCAGTAGCAGCAGCTTCTGCAGTATT 466 Query 170115 CTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGG 170174 |||||| || || | ||||| || || ||||| || || |||||| ||||||| || || Sbjct 467 CTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGATGGTATGCCTTTAGGTATTTCTGG 526 Query 170175 TACATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCA 170234 ||| || ||||||||||| ||||||||||| |||||||||||| | |||||||||||||| Sbjct 527 TACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCACAACATTTTAATGCACCCATTCCA 586 Query 170235 TATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACT 170294 ||||| || ||||||||| | || || || | | |||||||| |||||||||||| | Sbjct 587 CATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTATTCTCAGCTATGCACGGTTCATT 646 Query 170295 TGTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAA 170354 ||||| |||||| |||| | || ||||| || | ||| ||| ||||| || ||||| Sbjct 647 AGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGCGAATCAACTAACTACGGTTACAA 706 Query 170355 ATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACT 170414 |||||| |||||||||||||| |||||||| |||||||| || || ||||| ||| | | Sbjct 707 ATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCACGGTTACTTCGGTCGTTT 766 Query 170415 TATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATT 170474 ||||||||||| ||| || ||||| |||| | | ||||||||| | ||| || Sbjct 767 AATCTTCCAATACGCTTCATTCAACAACTCTCGTGCTTTACACTTCTTCTTAGCTTTATG 826 Query 170475 CCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAA 170534 || || || | |||||||||||| | ||||||||| | || ||||| || ||| | || Sbjct 827 GCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATTAGTACTATGGCGTTCAACTTAAA 886 Query 170535 TGGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGC 170594 || || ||||||||||| ||| | |||||| | ||| ||| | || ||||| Sbjct 887 CGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACACTTGGGC 946 Query 170595 AGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAA 170654 || | ||||| | || | ||||||||||||||||||| || ||||| || ||||| Sbjct 947 TGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTAATGCACGAACGTAACGCGCACAA 1006 Query 170655 CTTCCCACTTGACTTGGCAACTGCTGAGACATCTGAAGTTGCATTAATTGCTCCTTCTGT 170714 ||||||| | || || || | | ||| || |||||| |||| ||||| |||| Sbjct 1007 CTTCCCATTAGATTTAGCTTCAGGTGAAGTATTACCAGTTGCTTTAACAGCTCCAGCTGT 1066 Query 170715 T 170715 | Sbjct 1067 T 1067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582782167318400