Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq6036 682 0.0 >seq6036 Length=8020 Score = 682 bits (756), Expect = 0.0 Identities = 744/988 (75%), Gaps = 0/988 (0%) Strand=Plus/Minus Query 83968 CTGACGCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAA 84027 |||| || | ||| || |||||||| || ||||||||||||||||| ||||||||||| | Sbjct 1029 CTGAAGCTAAATCTAATGGGAAGTTGTGCGCGTTACGTTCGTGCATTACTTCCATACCTA 970 Query 84028 GCCCGGCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAA 84087 | ||||| |||| | ||| ||||| || |||| ||||| ||| ||| |||| Sbjct 969 AATCAGCACGGTTAACGATATCAGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAA 910 Query 84088 GACTCTGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAG 84147 || |||||||| || || || | || || ||||| || |||| ||||| ||||| Sbjct 909 CTGATTGGTTGAAGTTGAAACCGTTTAAGTTGAACGCCATAGTACTAATACCCATAGCAG 850 Query 84148 CAAACCAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGT 84207 ||||| || || | |||||||| ||| ||||| ||||| | || |||| |||| Sbjct 849 TTAACCAGATACCTAAAACTGGCCATAAAGCTAAGAAGAAGTGTAAAGCACGAGAGTTGT 790 Query 84208 TGAAGGAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTAT 84267 |||| ||||| || |||||||| | |||||||||||| |||||||| ||||| || || | Sbjct 789 TGAATGAAGCGTATTGGAAGATTAAACGACCGAAGTAACCGTGAGCTGCAACGATGTTGT 730 Query 84268 AAGTTTCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTT 84327 ||||||| |||||||||||||| |||||||| ||||| ||| | |||| || |||| Sbjct 729 AAGTTTCTTCTTCTTGACCGAATTTGTAACCGTAGTTAGTTGATTCGCTTTCAGTTGTTT 670 Query 84328 CTCGGATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGA 84387 | || |||| ||||||||| || | |||||| ||||| || ||||||| || ||||| | Sbjct 669 CACGAATTAAAGAAGAAGTTACTAATGAACCGTGCATAGCTGAGAATAAAGAACCACCAA 610 Query 84388 ATACACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGA 84447 ||||||||||||| || |||||| || || ||||| | ||||| || || || |||| Sbjct 609 ATACACCAGCAACACCAGCCATGTGGAATGGGTGCATTAAAATGTTGTGCTCAGCTTGGA 550 Query 84448 AGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAAC 84507 | || | |||| ||||||| || || || ||||| | ||||| ||||||||||| |||| Sbjct 549 ATACTAACATGAAGTTGAAAGTACCAGAAATACCTAAAGGCATACCATCAGAGAATGAAC 490 Query 84508 CTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAG 84567 |||| || | || || || | |||||| ||||| || ||||| |||||||||||| ||| Sbjct 489 CTTGACCAATTGGGTATACTAAGAATACTGCAGAAGCTGCTGCTACTGGAGCAGAGAAAG 430 Query 84568 CAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGT 84627 | || ||||||| ||||||||||| | ||| || || | |||||||||||||||||||| Sbjct 429 CTACGAAGATCCAAGGACGCATACCTAAACGGTAAGATAATTCCCATTCACGACCCATGT 370 Query 84628 AAGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATA 84687 ||| | | || | | ||||||| | || | | ||| ||||| ||||| || |||| Sbjct 369 AAGATGCTACTCCTAATAAGAAGTGACAAACGATTAATTGGTAAGGACCACCGTTGTATA 310 Query 84688 GCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAG 84747 ||| || || || |||||||||||||| || ||||| || | ||| ||||| |||| Sbjct 309 ACCACTCATCGATTGAAGCTGCTTCCCAAATTGGGTAGAAGTGCATACCGATAGCGTTAG 250 Query 84748 AGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTG 84807 | || | || |||||||| ||||||||||| ||||| | | ||||| || |||| Sbjct 249 AACTAGGGATAACTGCACCAGAGATGATGTTGTTACCGTATAATAATGAACCTGCTACTG 190 Query 84808 GCTCACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAAACAGA 84867 ||||||||||||| || ||||||||||| || || | | |||||| |||||| |||| Sbjct 189 GCTCACGGATACCATCGATATCAACTGGAGGAGCTGCGATGAATGCGATGATGTAACAAG 130 Query 84868 CAGTGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGT 84927 ||| || | | || || || | ||| | | ||||||||||| | || | ||||| Sbjct 129 AAGTTGCTGTTAATAATGTAGGGAACATTAAACAACCAAACCAACCGATGTATAAACGGT 70 Query 84928 TGTTAGTGGAGGTGACCCAATCACAGAA 84955 | | ||| || | |||| ||||||| Sbjct 69 TTTCAGTACTAGTAATCCAACCACAGAA 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571209074646880