Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq6036 553 5e-153 >seq6036 Length=8020 Score = 553 bits (612), Expect = 5e-153 Identities = 741/1024 (72%), Gaps = 10/1024 (1%) Strand=Plus/Minus Query 5159 GGTGCTGTTAAAGCTACTTCACTTGACTCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGA 5218 || ||||||||||| ||| | ||| | | |||| ||| | |||||||||||| Sbjct 1060 GGAGCTGTTAAAGCAACTGGTAATACTTCACCTGAAGCTAAATCTAATGGGAAGTTGTGC 1001 Query 5219 GCATTTCGTTCGTGCATTACTTCCATACCAAGGTTGGCACGGTTCAGGACATCTGCCCAA 5278 || || ||||||||||||||||||||||| | | |||||||| | || ||| |||||| Sbjct 1000 GCGTTACGTTCGTGCATTACTTCCATACCTAAATCAGCACGGTTAACGATATCAGCCCAA 941 Query 5279 GTGGGAACGATTCTACCGCTAGAGTCAACGACTGACTGATTGAAGTTAAAGCCGTTAAGA 5338 ||| | | | ||| || || || ||||| || |||||||| || ||||| | Sbjct 940 GTGTTGATTACACGACCTTGTGAATCTACAACTGATTGGTTGAAGTTGAAACCGTTTAAG 881 Query 5339 TTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATGCAAACGACGGGCCAAGTA 5398 || || |||||||| || ||||||| || | ||| || | | || ||||| | Sbjct 880 TTGAACGCCATAGTACTAATACCCATAGCAGTTAACCAGATACCTAAAACTGGCCATAAA 821 Query 5399 GCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAAGATGAGTCTC 5458 || | |||||| |||||| ||| ||||| || ||| || |||||||| | | Sbjct 820 GCTAAGAAGAAGTGTAAAGCACGAGAGTTGTTGAATGAAGCGTATTGGAAGATTAAACGA 761 Query 5459 CCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCCGAATTTATAT 5518 || ||||| || ||||| ||||| ||||| || |||||||| ||||| |||||||| || Sbjct 760 CCGAAGTAACCGTGAGCTGCAACGATGTTGTAAGTTTCTTCTTCTTGACCGAATTTGTAA 701 Query 5519 CCATAGTTCTGAGAAGTAAGCC--CAGTTGTTTCACGAATGAGCGAAGAAGTAACAAGAC 5576 || ||||| || | || |||||||||||||||| | |||||||| || | Sbjct 700 CCGTAGTTAGTTGA--TTCGCTTTCAGTTGTTTCACGAATTAAAGAAGAAGTTACTAATG 643 Query 5577 TTCCATGCATAGCAGCGAACAAAGCTCCACCGAATACCCCAGCAACACCGAGCATGTGGA 5636 || |||||||| | ||| |||| ||||| ||||| ||||||||||| |||||||| Sbjct 642 AACCGTGCATAGCTGAGAATAAAGAACCACCAAATACACCAGCAACACCAGCCATGTGGA 583 Query 5637 ACGGATGCATAAGGATATTGTGTTCTGCCTGGAATACGAACATAAAGTTAAAAGTACCAG 5696 | || ||||| | || ||||| || || |||||||| ||||| ||||| |||||||||| Sbjct 582 ATGGGTGCATTAAAATGTTGTGCTCAGCTTGGAATACTAACATGAAGTTGAAAGTACCAG 523 Query 5697 AGATACCAAGAGGCATACCATCACTGAAACTTCCCTGTCCGAAAGGGTATACTAAAAATA 5756 | ||||| | ||||||||||||| ||| || || || | ||||||||||| |||| Sbjct 522 AAATACCTAAAGGCATACCATCAGAGAATGAACCTTGACCAATTGGGTATACTAAGAATA 463 Query 5757 CTGAGTAGGCTGCGGCAACCGGTGCTGAATATGCTACGCAAATCCATGGTCGCATTCCTA 5816 ||| | ||||| || || || || || | |||||| | ||||| || ||||| |||| Sbjct 462 CTGCAGAAGCTGCTGCTACTGGAGCAGAGAAAGCTACGAAGATCCAAGGACGCATACCTA 403 Query 5817 ATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTAAGCTGCGATACC-AATAAGGAAGTGG 5875 | | |||| | |||||||| || |||| ||||| ||| | || |||||| ||||| Sbjct 402 AACGGTAAGATAATTCCCATTCACGACCCATGTAAGATGCTACTCCTAATAAG-AAGTGA 344 Query 5876 AAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCATTCATCGAGATTG--GCTGCTT 5933 | |||| | |||||| || || || ||||| | ||| ||||||| ||| ||||||| Sbjct 343 CAAACGATTAATTGGTAAGGACCACCGTTGTATAACCACTCATCGA--TTGAAGCTGCTT 286 Query 5934 CCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGAGCTGGGTACAACGGCTCCTGATA 5993 |||| || || |||||||| | || || ||||| || || || | ||| || || || | Sbjct 285 CCCAAATTGGGTAGAAGTGCATACCGATAGCGTTAGAACTAGGGATAACTGCACCAGAGA 226 Query 5994 TGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCGATGTCGA 6053 |||||||||| || || | || || ||||| || || ||||| || || ||||| || | Sbjct 225 TGATGTTGTTACCGTATAATAATGAACCTGCTACTGGCTCACGGATACCATCGATATCAA 166 Query 6054 CTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTA 6113 |||| || || || | |||||| | || | || |||||| ||||| | || || | Sbjct 165 CTGGAGGAGCTGCGATGAATGCGATGATGTAACAAGAAGTTGCTGTTAATAATGTAGGGA 106 Query 6114 TCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTTGGTGCTAGTAACCCAGTCAC 6173 |||||| ||||||||| || | || | ||||| | || ||||||| ||| ||| Sbjct 105 ACATTAAACAACCAAACCAACCGATGTATAAACGGTTTTCAGTACTAGTAATCCAACCAC 46 Query 6174 AGAA 6177 |||| Sbjct 45 AGAA 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152633220316296