Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq6036 581 1e-161 >seq6036 Length=8020 Score = 581 bits (644), Expect = 1e-161 Identities = 732/1004 (73%), Gaps = 6/1004 (1%) Strand=Plus/Minus Query 25444 TCAGCAGATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 25503 ||| | || ||||| || | ||||||||||| |||||||| || ||||| |||||||| Sbjct 1033 TCACCTGAAGCTAAATCTAATGGGAAGTTGTGCGCGTTACGTTCGTGCATTACTTCCATA 974 Query 25504 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 25563 ||||| || |||||||||| || ||||||||||| || || | || | ||||| Sbjct 973 CCTAAATCAGCACGGTTAACGATATCAGCCCAAGTGTTGATTACACGACCTTGTGAATCT 914 Query 25564 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATA 25623 || ||||| || |||||||| || ||||| | || || |||||||| | |||||| Sbjct 913 ACAACTGATTGGTTGAAGTTGAAACCGTTTAAGTTGAACGCCATAGTACTAATACCCATA 854 Query 25624 GCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTA 25683 || || | ||| || | || ||||| ||| | |||||| |||||| ||| Sbjct 853 GCAGTTAACCAGATACCTAAAACTGGCCATAAAGCTAAGAAGAAGTGTAAAGCACGAGAG 794 Query 25684 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 25743 || || || ||| || |||||||| | | || ||||| || ||||| ||||| ||| Sbjct 793 TTGTTGAATGAAGCGTATTGGAAGATTAAACGACCGAAGTAACCGTGAGCTGCAACGATG 734 Query 25744 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 25803 || || || ||||||||||| |||||||| || || ||||| ||||| ||||| Sbjct 733 TTGTAAGTTTCTTCTTCTTGACCGAATTTGTAACCGTAGTTAGTTGATTCGCTTTCAGTT 674 Query 25804 GTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCA 25863 ||||||||||| | || ||||| || | ||||||||||| | |||||||| ||| Sbjct 673 GTTTCACGAATTAAAGAAGAAGTTACTAATGAACCGTGCATAGCTGAGAATAAAGAACCA 614 Query 25864 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCC 25923 || ||||| || |||||||| ||| ||||| || ||||| | || ||||| || || Sbjct 613 CCAAATACACCAGCAACACCAGCCATGTGGAATGGGTGCATTAAAATGTTGTGCTCAGCT 554 Query 25924 TGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAA 25983 || || || ||||| || |||||||| || |||||||| | |||||||||||||||||| Sbjct 553 TGGAATACTAACATGAAGTTGAAAGTACCAGAAATACCTAAAGGCATACCATCAGAGAAT 494 Query 25984 CTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAA 26043 ||||| |||| ||||| ||||||||||| ||| | |||||||| || || || || Sbjct 493 GAACCTTGACCAATTGGGTATACTAAGAATACTGCAGAAGCTGCTGCTACTGGAGCAGAG 434 Query 26044 TAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCC 26103 ||||||| | ||||| || | ||| |||| | ||| | |||||||| || ||| Sbjct 433 AAAGCTACGAAGATCCAAGGACGCATACCTAAACGGTAAGATAATTCCCATTCACGACCC 374 Query 26104 AAGTAAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTA 26163 | ||||| || | || | | ||||| | || || | ||| || || |||||||| Sbjct 373 ATGTAAGATGCTACTCCTAATAAGAAGTGACAAACGATTAATTGGTAAGGACCACCGTTG 314 Query 26164 TACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCG 26223 || |||||||| |||| | || |||||||| |||||||||||||| | |||||| ||| Sbjct 313 TATAACCACTCATCGATTGAAGCTGCTTCCCAAATTGGGTAGAAGTGCATACCGATAGCG 254 Query 26224 TTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAG 26283 ||||| |||| | ||| || |||||||||||||| || || | ||||| |||| Sbjct 253 TTAGAACTAGGGATAACTGCACCAGAGATGATGTTGTTACCGTATAATAATGAACCTGCT 194 Query 26284 ACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTA---AA 26340 || |||||||| |||||||| ||||| || ||||| || || | ||||| || | || Sbjct 193 ACTGGCTCACGGATACCATCGATATCAACTGGAGGAGCTGCGATGAATGCGATGATGTAA 134 Query 26341 AATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAG 26400 | | || ||||||||| | || ||||| ||||| |||||||| || | || Sbjct 133 CAAGAAGT---TGCTGTTAATAATGTAGGGAACATTAAACAACCAAACCAACCGATGTAT 77 Query 26401 AGGCGGTTGTTTGTACTTGTAACCCAGTCACATAAACTTTCCCA 26444 | ||||| | ||||| |||| ||| |||| |||| |||||| Sbjct 76 AAACGGTTTTCAGTACTAGTAATCCAACCACAGAAACGTTCCCA 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151977290706736