Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq4979 165 1e-35 >seq4979 Length=1283317 Score = 165 bits (182), Expect = 1e-35 Identities = 292/421 (69%), Gaps = 15/421 (4%) Strand=Plus/Minus Query 22959 GTAGGAAACTTCGCACTCTTCATCAGATTCAAAGAACAGAATTTGTGCGCAACCTTCGCC 23018 |||||| |||||| || || || || |||||||| | || |||||||||||||| Sbjct 899492 GTAGGAGGTTTCGCAGATCTCGTCCGACTCGAAGAACAGCACCTGGGCGCAACCTTCGCC 899433 Query 23019 AGCGTAGATCAGTGCCGGGCTTGGTGTGGTATTGGAAAACTCCAGAGTAAGCGAGCCTTT 23078 |||||||||| ||||| || || || |||||||||||||| || | |||||| Sbjct 899432 AGCGTAGATCTTGGCCGGAAGCGGCGTCGTGTTGGAAAACTCCAGGGTCACGTAGCCTTC 899373 Query 23079 CCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTT 23138 ||| || || || | |||||||| || |||||||||||||| || || || || || Sbjct 899372 CCACTCCGGCTCGAAAGGCGTGACATTGACGATGATGCCGCAGCGGGCGTAAGTGCTCTT 899313 Query 23139 GCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAG 23198 ||| ||||| || | || ||||| || |||| ||| | || || | Sbjct 899312 GCCAAGGCAAATGGTGAGCACCGAGCGCGGGATACGAAAGTATTCGAGGGTACGCGCTAA 899253 Query 23199 TGCGAAACTGTTCGGCGGAATGAT-CAGGCCTTGGCCGTTTGGAACGTGCTTCGTAACGA 23257 ||||| || ||||||||||| ||| | | || | | || | ||| || Sbjct 899252 CGCGAAGGAATTGGGCGGAATGATGCAGACATCGGAC---TCGATC-----TCG--AC-- 899205 Query 23258 AATTGTCTTCGG--TGAAATTCTTTGGATCGACAACCGCGTTATTCAGGTTGGTGAAAAC 23315 || | |||||| ||| ||||| |||||||| || | || | ||||||||| || Sbjct 899204 AAAGGACTTCGGGTCGAAGTTCTTGGGATCGACGACGGTTGAGTTGATGTTGGTGAATAC 899145 Query 23316 CTTGAATTCGTTACCGCAACGAATATCGTAGCCGTAGCTGGAAACACCGTAGGGAATGAT 23375 ||||||||| |||| |||||||||||||| ||||| ||| |||||||| || ||| Sbjct 899144 CTTGAATTCTCGGGCGCAGCGAATATCGTAGCCATAGCTCGAAGTACCGTAGGAAACGAT 899085 Query 23376 C 23376 | Sbjct 899084 C 899084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897492216802880