Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq112 82.4 7e-11 >seq112 Length=422422 Score = 82.4 bits (90), Expect = 7e-11 Identities = 199/298 (67%), Gaps = 4/298 (1%) Strand=Plus/Minus Query 111143 GCGATCGCATTAATGGTCAAGTCCCGGCGGGCCAAATCCTCTTCGATGGTCACATCTGGG 111202 || || ||||| ||||||||||| |||||||| | ||| ||||| | || ||||||| Sbjct 90929 GCCATGGCATTGATGGTCAAGTCGCGGCGGGCAAGATCATCTTCCAGCGTGACATCTG-- 90872 Query 111203 CTGAA-CATC-ACCTCGAAATCGTGGTATCCTGCGCCAGTTGAACGCTCGGTACGGGCAA 111260 ||| | ||| | | || |||| || || || || || ||||||||||||| Sbjct 90871 CTGCAGCATGGAAGGCAAAGCCGTGATAGCCCCGACCGGTCTTGCGTTCGGTACGGGCAA 90812 Query 111261 GGACGTACTCTTCCTTGGTCTCAGGATGCAGGTAAACTGGGAATGCGGCACCGACTTGCT 111320 | | || || || |||| ||||| ||| | || || || | |||||| | Sbjct 90811 GCGCATATTCCTCGCCGGTCAGCGGATGAAGGAAGACGGGAAAATCCTTGCCGACTGGGC 90752 Query 111321 CGAAGCCGAGTGCCATCATCTCTTCGTGGGTGGAGCCGACCACAACGTAGTCACGGTCTT 111380 ||| || |||| | ||||| || | | || ||||||||| ||||| || ||||| Sbjct 90751 GGAAACCCCGTGCTAGCATCTGTTTCGGCGAGGCGCCGACCACCACGTAATCGCGGTCGG 90692 Query 111381 TGCTCTCAACACCCATCAGTTCATCGCGGACCGCGCCGCCGACCAGATAGATTTTCAT 111438 | || | || | || | ||||| || || || ||||| || ||||| | ||| Sbjct 90691 CGTTCGCCCTGCCGAGCAACGCGTCGCGCACTGCACCACCGACGAGGTAGATCTCCAT 90634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477491661224480