Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_018087.3 Length=166687 Score E Sequences producing significant alignments: (Bits) Value seq4979 87.8 2e-12 seq112 82.4 8e-11 >seq4979 Length=1283317 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 75944 TTGGTGGGCCTCCCCAGACTTGAACTGGGAACCAACGGATTATGAGTCCGCTGCTCTAAC 76003 |||||||||| | | ||||||||| | | ||||| ||||||||||||| ||||||| || Sbjct 60127 TTGGTGGGCCCGCACGGACTTGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTGAC 60186 Query 76004 CAATTGAGCTAAAGGCCC 76021 ||| ||||||| |||||| Sbjct 60187 CAACTGAGCTACAGGCCC 60204 >seq112 Length=422422 Score = 82.4 bits (90), Expect = 8e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 73362 ATGATTTGAACATTCGACACCTGCGTCCCAAACGCAGTGCTCTACCAGACTGAGCTATAC 73421 |||||| |||||| |||| |||||||||| |||||||||||||||||| |||||||| || Sbjct 100726 ATGATTCGAACATGCGACCCCTGCGTCCCGAACGCAGTGCTCTACCAGGCTGAGCTACAC 100785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533210167108320