Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq4979 140 1e-28 >seq4979 Length=1283317 Score = 140 bits (154), Expect = 1e-28 Identities = 229/330 (69%), Gaps = 0/330 (0%) Strand=Plus/Plus Query 9960 CGACATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAAC 10019 ||||||||||||||| || |||| || |||| |||||||| ||| || |||||| Sbjct 318233 CGACATGGCATCCGTTAATAAAGCAATTATCGTTGGCAATCTGGGCAAGGATCCGGAAGT 318292 Query 10020 CCGCTACCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTA 10079 | | || | || ||||| || || | |||||| | || || | ||| || Sbjct 318293 CAGATATACGGCCAGTGGCGAGGCGATTTGCAACATTACTGTGGCGACCAGCGAAAACTG 318352 Query 10080 CAAGGACAAGGCGAGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGTCAGCTTCTT 10139 ||||||||| ||| ||| |||| ||| ||| |||||| ||||| ||| | || || Sbjct 318353 GAAGGACAAGACGACCGGAGAGAAGAAAGAACAGACCGAGTGGCATCGCATTTCTTTTTT 318412 Query 10140 CGGCCGCCTCGCCGAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGGTCTACATCGA 10199 ||| || || || | | | | |||| || ||||| ||| | |||| |||| Sbjct 318413 CGGAAAGCTGGCTGAAGTTGCAGGCCAGTATCTTAAAAAGGGATCGCAGATCTATGTCGA 318472 Query 10200 GGGCCGCATCCGCACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGCTACACGACCGA 10259 |||| | ||||| || ||||||||| || || | |||||||| || ||||||||||| Sbjct 318473 GGGCAGTATCCGTACCCGGAAGTGGACCGACAAGGAAGGCCAGGAGCGTTACACGACCGA 318532 Query 10260 GATCGTCGCCGAGAAGATGCAGATGCTCGG 10289 ||| || ||| ||||| | |||||||| Sbjct 318533 GATTCGCGGCGACGAGATGAAAATGCTCGG 318562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197767576767288