Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1112 91.5 1e-13 >seq1112 Length=3255245 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| | | | ||| || |||||||||||||| || || |||||||| |||| Sbjct 2620683 TTCCACCTCTCAGTCTGAGAACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAGTCGG 2620742 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | | |||| || | ||||| ||||| || ||||| ||||| || || || | Sbjct 2620743 AAAGGGTGCGGCCATCCTCAAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGGGG 2620802 Query 101361 GAATGCCTTCTTTATCTTGAAtttt 101385 | || ||||| || || || ||||| Sbjct 2620803 GGATTCCTTCCTTGTCCTGGATTTT 2620827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396234759345852