Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq7336 114 2e-20 >seq7336 Length=1249 Score = 114 bits (126), Expect = 2e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 197075 GGTTGTCGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCA 197134 |||| || |||| ||| ||| | || | |||| | ||||| ||| | || ||| || Sbjct 910 GGTT-TCTGGATCGTAGCAGCCCAGCAGGAAACCTCCGTAAACTCCAGCTCGCTTGCCTC 852 Query 197135 CCCCGTTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAAT 197194 ||| | | ||||||| || |||| |||||||||||| | || ||||||| ||||| Sbjct 851 TCCCCAAGTAACCTCCGAGGACAACCAAATCCAGAGTGTCTCCAACACCTTCCAGGTAAT 792 Query 197195 CTTTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGT 197254 | ||||||||||| ||||| | | ||| | ||||||||||||||||| || | | | Sbjct 791 CCTTCTTCAGTTTCAGCCAATTGCGAGAGCGTTTGGCAATCTCGTAGGTGGCTTCCTCCT 732 Query 197255 CCAGGGTCTTGATCATCAATCCCTCGCA 197282 ||| || || | ||| | |||||||| Sbjct 731 CCAAAGTTTTTACCATGAGACCCTCGCA 704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676653163391680