Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq4979 98.7 2e-15 seq2001 89.7 9e-13 >seq4979 Length=1283317 Score = 98.7 bits (108), Expect = 2e-15 Identities = 77/91 (85%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 132960 GATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCA 133019 || |||||||||||||||| || ||||||| ||||||||||| ||||||| |||||| Sbjct 701729 GACGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCA 701788 Query 133020 AATCCCTCCCCCGCATCCA-CAAGCTGAAGC 133049 ||||| |||||||| ||| ||| ||||||| Sbjct 701789 AATCCTGCCCCCGCAACCAGCAAACTGAAGC 701819 >seq2001 Length=3286380 Score = 89.7 bits (98), Expect = 9e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 132962 TGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAA 133021 ||||||||||||||| | ||||||||||| ||||||||||| ||||||| |||||||| Sbjct 796253 TGCGGGGTGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCAGAGGTTCAAA 796312 Query 133022 TCCCTCCCCCGCATCCA 133038 ||| ||||||| ||| Sbjct 796313 TCCTCTCCCCGCAACCA 796329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895665223185120