Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq6036 724 0.0 >seq6036 Length=8020 Score = 724 bits (802), Expect = 0.0 Identities = 748/979 (76%), Gaps = 0/979 (0%) Strand=Plus/Plus Query 162539 TCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCA 162598 |||||||||| ||| || ||| ||||| || | ||||| | |||| | ||||| Sbjct 82 TCGGTTGGTTTGGTTGTTTAATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCA 141 Query 162599 TTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTT 162658 | |||||||| ||||| |||||||||||||||||||||||| | || || || ||||||| Sbjct 142 TCGCATTCATCGCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTT 201 Query 162659 CACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTG 162718 || | | || ||||||||||||||||||||||| || | |||||||| || ||||| | Sbjct 202 CATTATTATACGGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCG 261 Query 162719 GTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTG 162778 || | |||||||| || || ||||||||||| | | ||||||||||| || || |||| Sbjct 262 GTATGCACTTCTACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTG 321 Query 162779 GACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTC 162838 | |||| |||| | | || | |||||| | | ||| | || | ||| |||||| Sbjct 322 GTCCTTACCAATTAATCGTTTGTCACTTCTTATTAGGAGTAGCATCTTACATGGGTCGTG 381 Query 162839 AGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCAC 162898 | |||||| | |||||||| |||||||||||||||||||||| || || | |||||| | Sbjct 382 AATGGGAATTATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTC 441 Query 162899 CAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTG 162958 ||||| | ||||| | || || ||||| || || || | ||||||||||| ||||||| Sbjct 442 CAGTAGCAGCAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTG 501 Query 162959 ACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGC 163018 | | |||||| | ||||||||||||||||| |||| |||||| || |||||||| |||| Sbjct 502 ATGGTATGCCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGC 561 Query 163019 ACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCAC 163078 ||||||| |||||||||| ||||| ||| ||| || || |||||||| |||||||| Sbjct 562 ACAACATTTTAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTT 621 Query 163079 TCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGC 163138 | || |||||||||||||| | || ||||||||| | || | ||||| ||||| Sbjct 622 TATTCTCAGCTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAA 681 Query 163139 AAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTG 163198 || ||| ||||||||||| || ||||| ||||||||||| ||||||||||| |||| Sbjct 682 GCGAATCAACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTG 741 Query 163199 CTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTT 163258 | ||||| || ||||| ||||| || |||||||| || || || ||||||||||| ||| Sbjct 742 CAGCTCACGGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTG 801 Query 163259 CACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTG 163318 | | ||||||||| | ||| || || || | | |||||||| ||||| |||||| Sbjct 802 CTTTACACTTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTA 861 Query 163319 TGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGACGCAG 163378 | |||||||| |||||| | ||||||||||||||||||||||| || || || || Sbjct 862 TTAGTACTATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCAC 921 Query 163379 GTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAG 163438 ||| || || |||||||| |||||| ||||| | || | | |||||||||| Sbjct 922 AAGGTCGTGTAATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAG 981 Query 163439 TTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTGCTGAGACATCTC 163498 | |||||||| ||||| || |||||||||||| | || | ||| | | ||| || | Sbjct 982 TAATGCACGAACGTAACGCGCACAACTTCCCATTAGATTTAGCTTCAGGTGAAGTATTAC 1041 Query 163499 AGGTTGCTCTAACTGCACC 163517 |||||| |||| || || Sbjct 1042 CAGTTGCTTTAACAGCTCC 1060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553022329071840