Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq6036 681 0.0 >seq6036 Length=8020 Score = 681 bits (754), Expect = 0.0 Identities = 756/1004 (75%), Gaps = 6/1004 (1%) Strand=Plus/Plus Query 162883 TGGGAATCTTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 162942 |||||| |||||| | ||| | ||| ||| | ||||| | || |||||||||| Sbjct 33 TGGGAACGTTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTT 92 Query 162943 GGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGTTTCATCGTCGCCTTCGTC 163002 || | ||| | || || | || |||||||| |||| |||| |||| ||| || Sbjct 93 GGTTGTTTAATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCATTCATC 152 Query 163003 GCTGCTCCCCCTGTGGACATTGACGGCATCCGTGAGCCCGTCGCTGGTTCACTCATGTAT 163062 || ||||| || || || || || || ||||||||||| || || |||||| | | || Sbjct 153 GCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTATTATAC 212 Query 163063 GGCAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTC 163122 || |||||||||||||||||||||||| | || ||| ||||| || ||| | |||||| Sbjct 213 GGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATGCACTTC 272 Query 163123 TATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAA 163182 || || || |||||||| || ||| | ||||||||| | || ||||||||||||| |||| Sbjct 273 TACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCTTACCAA 332 Query 163183 CTCGTAGTCTTTCACTTCCTTATCGGCATCTATGCATAT---ATGGGACGTGAATGGGAA 163239 | | || | ||||||| |||| | | || |||| | ||||| |||||||||||| Sbjct 333 TTAATCGTTTGTCACTTC-TTATTAGGAG-TA-GCATCTTACATGGGTCGTGAATGGGAA 389 Query 163240 CTTTCATATCGCTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCACCTGTTGCA 163299 | || || || ||||||||||| || ||||||| ||||| | |||||| || || ||| Sbjct 390 TTATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCAGTAGCA 449 Query 163300 GCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATG 163359 ||||| || ||||| ||| | || || || | ||||||||||| |||||||| | ||| Sbjct 450 GCAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGATGGTATG 509 Query 163360 CCACTTGGCATCTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATC 163419 || | || || ||||| || ||||||| |||| | || |||||||| ||||||||||| Sbjct 510 CCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCACAACATT 569 Query 163420 CTGATGCACCCCTTCCATATGTTGGGAGTCGCTGGTGTCTTCGGTGGATCACTCTTCTCG 163479 | |||||||| ||||| ||| || || |||||||| || ||||| || | ||||| Sbjct 570 TTAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTATTCTCA 629 Query 163480 GCAATGCATGGCAGTCTTGTTACCTCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCA 163539 || ||||| || | || || ||||| | | ||||| || ||||||| || ||| Sbjct 630 GCTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGCGAATCA 689 Query 163540 CAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACAT 163599 ||||| |||||||| || |||||||||||||| || ||||||||||||||||| || Sbjct 690 ACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCAC 749 Query 163600 GGCTACTTCGGTCGTTTGATCTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCAC 163659 || |||||||||||||| ||||||||||| || |||||||||||| | | | ||| Sbjct 750 GGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCTTTACAC 809 Query 163660 TTCTTCCTGGCAGCATGGCCTGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACC 163719 |||||| | || |||||| || | || |||||||| ||||| |||| | || || Sbjct 810 TTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATTAGTACT 869 Query 163720 ATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGT 163779 ||||| |||||| | |||||||||||||||||||| || | | ||| || |||||| Sbjct 870 ATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGT 929 Query 163780 GTGCTCAACACTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCAT 163839 || ||||||||||||| || | ||||||| |||| | | ||||||||||| ||||| Sbjct 930 GTAATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTAATGCAC 989 Query 163840 GAGCGTAACGCACACAACTTCCCACTCGATCTTGCTGCTGCTGA 163883 || |||||||| |||||||||||| | ||| | ||| | | ||| Sbjct 990 GAACGTAACGCGCACAACTTCCCATTAGATTTAGCTTCAGGTGA 1033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563145985475680