Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2057 127 4e-24 seq1813 95.1 2e-14 >seq2057 Length=842785 Score = 127 bits (140), Expect = 4e-24 Identities = 204/287 (71%), Gaps = 17/287 (6%) Strand=Plus/Plus Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430 |||||| | ||| || |||||||||||||||||| | |||||||||||||| || | Sbjct 607645 GGGGTAGTAATTGGCATCAATGATCTTGTTGAGGTTGAGAGTGGCCACTTTGGTAACTT- 607703 Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGC---ACAAACTCAGGCAGGGC 213487 ||| ||| || | | |||| | ||| || ||| || || || Sbjct 607704 --CCATCAACTTCTGGTAGT---CGTAAGTACGGTCTGGCTTGACATACATGTTGAGAGC 607758 Query 213488 GATGCTGGCCAGGTTGCAAACGGCCACCTCCT---GAGAGTCTGTGTACTCCATGATCTC 213544 || | || ||||| || || |||||||| | ||||| ||||||||| ||||| Sbjct 607759 GAGGGAAGCAAGGTTACACACTGCCACCTCATCAGGAGAGC---TGTACTCCACAATCTC 607815 Query 213545 GGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGC 213604 ||||| || |||||||| ||||||||| |||||||| ||||| ||||| ||| | || Sbjct 607816 AGTGCAGAGATTGCTGCACTTGATGGTGCCAAGGTTCTGTTGGTTGGACTT-GCGGTTGC 607874 Query 213605 A-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGAC 213650 | | ||| ||||||||||||||||| | || || || | ||||||| Sbjct 607875 ATGCATCTTTGTAGAGCATGTAGGGAGTGCCTGTTTCCACCTGGGAC 607921 Score = 114 bits (126), Expect = 2e-20 Identities = 93/113 (82%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| || ||||||||||| || | ||| | || || ||||||||||||||||| Sbjct 606800 CTGGAATTCTCCTGAGAGCACTCTGCGAGTGTAGATATTGGAGGTGTAGGGCTCGATGCT 606859 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCA 213030 ||||||||| || |||||||| |||||| |||||| ||||||||||||| || Sbjct 606860 CTCGTTGTTGCCGAGAATCTGAGCAGTGGAGGCTGTAGGCATGGGAGCCAGCA 606912 >seq1813 Length=735787 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 |||||| || ||||| || ||||| || ||||||||||| || |||||| | || || Sbjct 439163 GTACATTTCTGAGTGGACGTTCTCCATGGCGATCTGGAAGCCATAGAAGCAGCGAGCTTC 439104 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 ||||||||| || | ||| ||||||| ||| ||||||||||| || || || || Sbjct 439103 CGGCACCTGCACCTCCTGGCTGAACCTCTCCACCAGGTTCTCATTGACGATGCCGTCAGA 439044 Query 48544 AGCAGCAAAGAAGGC 48558 ||||| ||||| || Sbjct 439043 CGCAGCGAAGAACGC 439029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931427583370240