Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq2057 127 4e-24
seq1813 95.1 2e-14
>seq2057
Length=842785
Score = 127 bits (140), Expect = 4e-24
Identities = 204/287 (71%), Gaps = 17/287 (6%)
Strand=Plus/Plus
Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430
|||||| | ||| || |||||||||||||||||| | |||||||||||||| || |
Sbjct 607645 GGGGTAGTAATTGGCATCAATGATCTTGTTGAGGTTGAGAGTGGCCACTTTGGTAACTT- 607703
Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGC---ACAAACTCAGGCAGGGC 213487
||| ||| || | | |||| | ||| || ||| || || ||
Sbjct 607704 --CCATCAACTTCTGGTAGT---CGTAAGTACGGTCTGGCTTGACATACATGTTGAGAGC 607758
Query 213488 GATGCTGGCCAGGTTGCAAACGGCCACCTCCT---GAGAGTCTGTGTACTCCATGATCTC 213544
|| | || ||||| || || |||||||| | ||||| ||||||||| |||||
Sbjct 607759 GAGGGAAGCAAGGTTACACACTGCCACCTCATCAGGAGAGC---TGTACTCCACAATCTC 607815
Query 213545 GGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGC 213604
||||| || |||||||| ||||||||| |||||||| ||||| ||||| ||| | ||
Sbjct 607816 AGTGCAGAGATTGCTGCACTTGATGGTGCCAAGGTTCTGTTGGTTGGACTT-GCGGTTGC 607874
Query 213605 A-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGAC 213650
| | ||| ||||||||||||||||| | || || || | |||||||
Sbjct 607875 ATGCATCTTTGTAGAGCATGTAGGGAGTGCCTGTTTCCACCTGGGAC 607921
Score = 114 bits (126), Expect = 2e-20
Identities = 93/113 (82%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977
|||||| || ||||||||||| || | ||| | || || |||||||||||||||||
Sbjct 606800 CTGGAATTCTCCTGAGAGCACTCTGCGAGTGTAGATATTGGAGGTGTAGGGCTCGATGCT 606859
Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCA 213030
||||||||| || |||||||| |||||| |||||| ||||||||||||| ||
Sbjct 606860 CTCGTTGTTGCCGAGAATCTGAGCAGTGGAGGCTGTAGGCATGGGAGCCAGCA 606912
>seq1813
Length=735787
Score = 95.1 bits (104), Expect = 2e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
|||||| || ||||| || ||||| || ||||||||||| || |||||| | || ||
Sbjct 439163 GTACATTTCTGAGTGGACGTTCTCCATGGCGATCTGGAAGCCATAGAAGCAGCGAGCTTC 439104
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543
||||||||| || | ||| ||||||| ||| ||||||||||| || || || ||
Sbjct 439103 CGGCACCTGCACCTCCTGGCTGAACCTCTCCACCAGGTTCTCATTGACGATGCCGTCAGA 439044
Query 48544 AGCAGCAAAGAAGGC 48558
||||| ||||| ||
Sbjct 439043 CGCAGCGAAGAACGC 439029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931427583370240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |